Pseudomonas siliginis: NF676_04855
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Entry
NF676_04855 CDS
T08569
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psii03019
]
NF676_04855 (rapZ)
Messenger RNA biogenesis [BR:
psii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NF676_04855 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_28
AAA_22
CoaE
AAA_29
nSTAND_NTPase5
RsgA_GTPase
FtsK_SpoIIIE
T2SSE
ABC_tran
AAA_16
SKI
Motif
Other DBs
NCBI-ProteinID:
UST80650
LinkDB
All DBs
Position
complement(1002869..1003726)
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALNVLEDNGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEDVRAKHIKCDVLYLDADEETLLKRFSETRRRHPLSNANRSLAEA
IHDETALLGPIADLADLKINTTSLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRAQSGLDAPVAEYLAQQPDVEEMYQDIYAYLNKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQALQKTLKNVQVRHRDLT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcattgtcagtggccgttcgggctcgggtaaaagtaccgccctgaatgtc
cttgaggacaacggctactactgcatcgacaatctgccggccggtttgctgccggaactg
gccgagcgggcgctgattcacacggaactggcgcagccgctggtcgccgtgtcgatcgat
gcgcgcaacctgcccagccatctgtcacgtttccctgagttgctcgaagacgtgcgtgcc
aagcatatcaagtgcgatgtgctgtacctggacgccgatgaagaaaccctgctcaagcgt
ttttccgagacccgtcgtcgtcacccgctgagcaacgccaatcgctcactggccgaggcg
attcacgacgaaaccgccctgctcggtccgattgccgatctggccgacctgaagatcaac
accaccagtctgaatctgtatcaactgcgcgacaccatcaagttgcgcctgttgaatcaa
ccggagcccggtacggcgtttctggtcgagtcgttcggcttcaagcgcggcatgccggtc
gacgccgacctggtgttcgacgtgcgctgcctgcccaatccgtactggaaaccggagctg
cgcgctcagtcgggccttgatgcaccggtggccgagtacctggcgcagcagccggatgtc
gaagaaatgtatcaggacatctacgcctacctgaacaagtggctgccacgcttcgccgcc
agcaaccgcgcctacgtcaccattgccattggctgcaccggcgggcatcaccgctccgtc
tacctgaccgaacgactgggtcaggccctgcagaaaaccctgaagaacgtccaggttcgc
caccgcgacctcacctaa
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