Pseudomonas siliginis: NF676_05185
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Entry
NF676_05185 CDS
T08569
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psii
Pseudomonas siliginis
Pathway
psii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF676_05185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psii03021
]
NF676_05185
Transcription machinery [BR:
psii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF676_05185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_20
HTH_24
GerE
HTH_28
HTH_5
HTH_10
HTH_7
HTH_11
Trp_repressor
HTH_36
HTH_38
HTH_40
TnsD
HTH_IclR
HTH_DeoR
HTH_29
Rv2175c_wHTH
PhyR_sigma-like
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UST80715
LinkDB
All DBs
Position
complement(1071304..1071834)
Genome browser
AA seq
176 aa
AA seq
DB search
MHVLYASFASGVISLPPAHPVESLYHAHHSWLTGWLRRKLGCPDSAADLAQDTFIKVLTA
REPPVIIEPRAFLTTLAKRVLFNHYRRQDVERAYLETLAQMPEMVVPSEEHKAIILQTLI
ELDELLDGLPRQVKRAFLLAQVDGLTYPQIAAELGISVATVKRHLNKAAMRCYFAL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttctctacgcaagttttgcgtccggagtcatttcgttgccgcccgcccatccc
gtcgaatcgctctaccatgctcatcacagctggctcactggctggttgcggcgcaagctc
ggctgccccgacagcgctgcggatctggcccaggacacgttcatcaaagtgctgaccgcc
cgcgagccaccagtgatcatcgagccgcgcgcctttctcaccacgctggccaagcgcgtg
ctgttcaatcattaccgacgccaggatgtggaacgcgcctacctcgagacgctggcgcag
atgcctgaaatggtcgtgccgtcagaagagcacaaagcgatcatcctgcagacgttgatc
gaactcgatgagctgctcgacggcttgccgcgccaggtcaaacgcgcctttctgctcgcg
caggtcgatggtctgacttatccacagatcgccgcagaactgggtatttcggtggccacg
gtcaaacgccatttgaacaaagcggccatgcgctgctatttcgctttatga
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integrated database retrieval system
