Pseudomonas siliginis: NF676_05590
Help
Entry
NF676_05590 CDS
T08569
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psii03000
]
NF676_05590
Transcription factors [BR:
psii03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NF676_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_Crp_2
TrmB
HTH_11
MarR_2
HTH_20
HTH_IclR
RP-C
CggR_N
DUF4423
HTH_24
Ribosomal_S25
LexA_DNA_bind
HTH_36
MarR
EAP30
Motif
Other DBs
NCBI-ProteinID:
UST80796
LinkDB
All DBs
Position
complement(1172214..1172945)
Genome browser
AA seq
243 aa
AA seq
DB search
MNDLQPLRPDDSQPTPLYLQLARNLEAAIHAGQWKAEQAMPSERNLSDQLGISRVTARKA
LEVLLEQGLIRRLQGSGTFITPRLEQPLSRLSGFSEMLRLKGFVPSSKWLEREITLPTHE
ELIRLSLSPNDKVARMKRLRKADDTVMAIEMSTLPASIMPRPQAVGDSLYEYLDGIGKPI
VRALQHIQAINASDEFAALVGIAPGTAMLLMTRVGYLEDNTPIEVTDTYCRNDYYDFVAE
LRR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctccagcccctacgtcccgacgattcccagccgacgccgctgtacttgcaa
ctggcgcgcaatctggaagcggcgattcatgccgggcagtggaaggccgaacaggcgatg
ccgtccgagcgcaacctcagcgaccagctcggcatttcccgggtcaccgcacgcaaggcg
ctggaagtcttgcttgagcaaggcctgatccgccgcctgcaaggctccggcaccttcatc
accccacgcctggaacaaccactgtcgcgtctgtccggcttcagcgaaatgctgcgcctg
aaaggtttcgtgccgagttcgaaatggctggagcgggagatcaccctcccaacccacgaa
gaactgatccgcctcagcctgtcgccgaatgacaaggtggcgcgcatgaagcgcctgcgc
aaagccgatgacacggtcatggcgatcgagatgagcaccctgcccgcgtcgatcatgccc
aggccgcaagcggtgggcgattcgctgtacgaatacctcgacggcatcggcaaaccgatc
gtccgcgcccttcagcacatccaggcaatcaacgcctctgacgaattcgccgcactggtc
ggcatcgcccccggcaccgccatgctgctgatgacccgggtcggctatctggaagacaac
acgccgatcgaagtcaccgacacctattgccgcaacgactactacgactttgttgcagag
ctgcgccgctga
DBGET
integrated database retrieval system
