Pseudomonas siliginis: NF676_05755
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Entry
NF676_05755 CDS
T08569
Name
(GenBank) DUF6531 domain-containing protein
Organism
psii
Pseudomonas siliginis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
EndoU_bacteria
TEN_YD-shell
DUF4595
OCRE
DUF2963
Motif
Other DBs
NCBI-ProteinID:
UST80827
LinkDB
All DBs
Position
complement(1205961..1210736)
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AA seq
1591 aa
AA seq
DB search
MDRVAFVDNQLNTFKDSLKLYQEQTKTWYAQALDKGSRAADMPSLLGMERVIKVGNTSKA
VSMTDGNFTSNVAQCPLKGPLLIESKFESVYDIPVGDIEVEIVAVDGGAVSKVKLDAQGK
AAWTGGVPGKFYTIRVHNEVTPAQIDALFSSYSGVTADLEGFLRKEWAGFKPQWSNLSTS
GTAMAIGNGILEGGWEAIKGVWDGISLVLDILQDPGKFAKDLGAGADELIKVAKSSPDIM
KKAMLLASDEAALFLLVRSAVIWLAGLPPMKMAGDVAKMTTAIVVGIAIDIVIGVVLTIA
AEGTGVIYLAARLKKYGELVIKAVIGFVKSVFKIINGFMEYVAKYTAVAARGITAKVRNG
ISELRFDGKKNARLADGKVADDVSNQATNPAEKSAEPAAKTCTNGCPVSMVTGEELLTLT
DGQLDGLLPFEWTRLYRTSAVEIDCGLGYGWSHALAHRIEINGDEVIWTDQENRSTVFPL
PSEQRPAITNSLSHAAIFLGDDPSELILAQAGKRPSFYHFRFDSKGATLIAISDSYGNRL
HVTRDIHGRIKRLDNGAGRALLLRYDRKHIIAVDYQQFLPADNLEDVWNTVQTLVTYSYD
AQHRLIEAKNAAGEAERYRYNEQHVILERQLAGGAAFYWEWENEGKLSRCTRHWANFSQM
EAQYVWDDKGSVTVTNADGSEEVYTHDDQARLISKIDPDGAEHLKAYNDKGQLIAEKDPL
GAVTEYRYDDNGLMTAVIPPEDEATTYEYINGFVSDVRRGKASWKYQRNRQGDVTAQIDP
DGNASHYSYDPQGRLLEIRHPDGSRHQLGWNNLGQLLEERLPDGGQRKYRYDALGRQITR
QEESGAITHYQWDAANRLAQVTLPGGATRAFSYNAYGNVTAERDELGRITRYEYADNLHL
VSRRINPDGSQLRYRYDNSRLLLTEIENERGEHYHLDYYANGLIQQETGFDGRRTGYEYD
LNGQLLKKTEFGDDGSELVTEYQRDAAGRLLVKTLPDGEEIYYSYDALGRLVNVDDGHWP
LAYKYDLQDRLIEEHQGWGTLRYEYDSVGQLKHCRLPDGSKLDYRHQPGGQLTSIDLNGS
RLTSHQFNAGREQQRQQGLLLSQYQYDEQGRLQAHSVSQRDKHLFQRRYNYDANGNLAGI
DDSRKGNRSYHYDPLDRLISVRGAIPESFAHDPAGNLLGQNDLPAANLANVKGNRLLIQG
DRHYDYDAYGNLIRERRGTGQKLVTEYRYDCQHRLIGVSLPGGSTASYKYDAFGRRIEKT
VDSHTTEFLWQGERLIAESAENRYRSYIYEPGSFRPLAMLDGEGPLKAAPFYYQLDHLGT
PQELTDYSGEIMWSAKYRAYGNLAALDVNEIDNPLRFQGQYFDAETGLHYNRHRYYNPGT
GRFLTPDPIKLAGGLNSYQYVPNPTGWVDPLGLNTCPGAGDKDSSGNRTDQEEKKSKVDD
GSPEAPYTGPIPKAMQNKILYGTRSPGHNKPVGGHSAQVMNSPKYQYDIVSTNKDGTTSV
KNFKMILERKDGTIGWSAAKSPNRHTFAPKSWSDAKILRVTDEVAAEPGRVLRNDPGAVV
TEHTKIVDGVQWQVIKENDVITSSYPTGATP
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgttgcctttgttgacaaccaactgaacaccttcaaggacagtctgaagctg
tatcaggaacaaaccaaaacctggtatgcacaggccctcgacaagggtagccgtgccgct
gacatgccgtctttgctgggtatggagcgtgtcatcaaggtgggcaacaccagtaaagcg
gtgagcatgaccgacggtaacttcacctcgaacgtggctcaatgtccgctcaagggtccg
ttgctgatcgagagcaaattcgaatcggtttacgacattcccgtcggcgatatcgaagtc
gaaatcgtggccgtggacggtggtgctgtcagcaaggtcaaactcgacgcccaaggcaaa
gccgcatggaccggcggtgtgcccggcaagttctacacgattcgcgtccataacgaagtg
accccggcgcagatcgacgccctcttcagttcttacagcggcgtgactgcggaccttgaa
ggtttcctgcgcaaggaatgggccggcttcaaaccgcaatggtcgaatctttcgacctcc
ggcacagccatggccatcggcaacggcattcttgaaggtggctgggaagcgatcaagggc
gtatgggacggcatcagtctcgtgctcgacatccttcaggacccaggaaagtttgcgaag
gatctcggcgctggcgcagacgagctgatcaaagtcgccaagagctcgccggacatcatg
aaaaaggccatgttgctggccagcgacgaggcggctttgtttttgctggtgcgcagtgcg
gtgatctggctcgcgggcttgccgccgatgaagatggcgggcgacgtagcgaagatgacc
acggccattgtcgtaggcattgcgatcgacatcgtgatcggcgtggtattgaccatcgcg
gccgaaggtaccggcgtcatctaccttgcggcccgactgaagaagtacggagaacttgtc
atcaaggctgtgatcggcttcgtgaagtcggtgttcaagatcatcaacggttttatggag
tatgtcgccaagtacaccgctgtggcggcccgagggataacggcaaaggtcagaaacggg
atttccgagttgcgttttgatggcaagaaaaacgccagacttgctgacggtaaagtcgct
gatgacgtatcgaaccaggcgacgaatcccgccgaaaagagcgcagaacctgctgcaaag
acttgcactaacgggtgccctgtttcgatggtcactggcgaagagttattgacgttaact
gacggccaactcgacggcctgctgccattcgaatggacccgcctctatcgcaccagcgct
gtggaaatcgactgcggtctcggctatggctggagccacgcgctcgcccaccgcatcgag
atcaatggcgatgaagtcatctggaccgatcaggaaaaccgctccaccgttttcccactt
ccgagcgagcagcgtcccgccatcaccaacagcctatcgcacgcggccatttttctaggt
gacgatccatccgagctgattctcgcgcaggctggcaagcgaccatcgttctatcacttc
cgcttcgacagcaaaggcgcgaccctgatcgccatcagcgatagctatggcaaccgcttg
cacgttactcgcgacatccatgggcgcatcaaacgtctcgacaacggtgccggccgcgcc
ctgcttctgcgctacgaccgcaagcacatcatcgccgtcgattatcagcagtttctgccc
gccgataatctggaagacgtctggaataccgtgcagacgttggtcacctatagctacgac
gcgcaacatcgcctgatcgaggcgaaaaacgcggcgggcgaagccgagcgttatcgctac
aacgagcagcacgtcattctcgagcggcaattggcaggcggcgcggcgttctattgggaa
tgggaaaacgaaggcaaactgtctcgctgcactcgtcactgggccaacttttcgcagatg
gaagcgcagtacgtctgggacgacaaaggcagcgtcaccgtaaccaacgccgatggcagc
gaagaggtctatacccacgacgatcaggcccgattgatcagcaagatcgatccggatggt
gccgagcatctcaaggcctacaacgacaaaggccaattgatcgccgaaaaggatccgctg
ggcgcagtcactgaatatcgctatgacgataatggtttgatgaccgcggtcatcccgccg
gaagacgaagccaccacttacgagtacatcaatggtttcgtcagcgacgttcgtcgcggc
aaagccagttggaagtatcaacgcaaccgacaaggtgatgtcactgcgcagattgacccg
gacggcaatgccagccattacagctatgacccgcagggtcgtctgttggaaatccgtcac
ccggacggcagccgtcatcaactcggttggaacaatctcggtcaactgcttgaagaacgt
cttcccgacggcggtcagcgcaagtaccgttacgatgcactaggcaggcagatcactcgc
caggaagagtccggcgcgatcactcattaccaatgggatgctgccaatcgccttgcccaa
gttacgctgcccggcggcgccactcgcgcattcagctacaacgcctacggcaatgtcact
gctgaacgtgacgaacttggccgtatcacccgctatgaatatgccgacaatcttcacctc
gtcagccgccgaatcaatcccgacggcagccaactgcgctaccgctacgacaactcgcgt
ctgttgctcactgaaattgaaaacgagcgcggcgagcactatcaccttgattactacgcc
aacggcctgattcaacaggaaaccggcttcgatggtcgtcggactggctacgagtacgac
ctcaacggccaactgctgaagaaaaccgagttcggcgacgacggcagcgaactggtcacc
gaatatcagcgtgatgccgcaggccggttgcttgtaaaaacgctgcccgacggcgaagag
atttactacagctacgacgcgcttggccgcctcgttaacgttgacgacggccactggccg
ctcgcctacaaatacgacctgcaagaccgactcatcgaggagcaccaaggctggggcact
ctgcgctacgaatacgatagcgtcggccagctcaagcactgccgcttgcccgatggcagc
aaactcgattaccgccaccagcctggcgggcaactcaccagcatcgacctcaacggttct
cgcctgacctctcatcagttcaacgctggtcgagagcaacagcgccaacaaggtctgctg
cttagccaataccaatacgatgaacagggacgtctgcaagcgcacagcgttagccaacgg
gacaagcacctgttccagcgtcgctacaactacgacgccaacggcaacctcgccggaatc
gacgacagccgcaaaggcaaccgcagctatcactacgatccactggatcgcctgatcagc
gtacgcggcgccataccagagagcttcgcccatgacccggcaggcaacctcctcggccag
aatgacctgcccgcagccaacctcgccaacgtcaaaggcaaccgcctgctgatacaaggc
gaccgccattacgattacgacgcctacggcaacctgatccgcgaacgtcgcggcaccggc
caaaagctcgtcaccgaataccgctacgactgccagcatcgcctgatcggcgtcagcctg
ccgggtggcagcaccgcaagctacaaatacgacgcttttggccgccgcatcgagaaaacc
gtcgacagccataccactgaatttctatggcaaggcgaacgattgatcgccgaaagcgca
gaaaaccgttaccgcagctacatctacgaaccgggcagcttccgcccgttggcaatgctc
gacggcgaaggcccgctaaaagcggccccgttctactaccaactcgaccacctcggcacg
ccgcaggaactgaccgactacagcggcgagatcatgtggtcggcgaagtaccgcgcctat
ggcaacctcgccgcgctggacgtcaacgaaatcgataacccgctgcgttttcagggtcag
tatttcgacgccgagacaggcttacattacaaccgccaccgctactacaatccgggaact
ggacggttcttgacgcctgatccgatcaagcttgcgggtggtttgaatagctaccaatac
gtgcctaaccctacggggtgggtggatcctctaggattgaatacatgtcccggagccgga
gataaagattcatcaggtaaccgaactgaccaagaagaaaaaaaatcgaaagttgatgac
ggcagccccgaagcgccatataccggaccgatccccaaggcaatgcagaacaaaatactg
tatggcacacggagccccggccataacaaaccagtaggcggtcattcggcgcaggttatg
aactctccaaaatatcagtacgatattgtcagcactaacaaggacggaactaccagcgtt
aaaaattttaaaatgattttagagcgtaaggatggaaccatcggctggtctgcagcaaag
tctccaaatagacatacatttgcgccgaaatcttggagtgacgcgaaaatcttgagagtt
actgatgaggtagcagcagagccaggcagagtgttacggaacgatccaggcgcggtagtg
accgaacacaccaaaatcgtggacggagttcaatggcaggttattaaagaaaacgatgtc
atcacttcttcataccctacgggagcaacaccatga
DBGET
integrated database retrieval system
