Pseudomonas siliginis: NF676_07575
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Entry
NF676_07575 CDS
T08569
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psii03009
]
NF676_07575
Enzymes [BR:
psii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NF676_07575
Ribosome biogenesis [BR:
psii03009
]
Prokaryotic type
rRNA helicases
NF676_07575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UST81171
LinkDB
All DBs
Position
1590637..1591977
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AA seq
446 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSVNR
PKPDSLVSSDGMAPLKRRKPAEPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccaacgccagtgcaagccgcggccatcccgctggcgctccaggggcgtgatctg
cgggtgacggcgcaaaccggtagcggcaaaaccgccgctttcgtcttgccgatcctcaat
cgcctgatcggcccggcgaagatccgcgtcagcatcaagacgctgatcctgctgccaacc
cgtgagctggcccagcagactttgaaggaagtcgaacgcttctcgcagttcaccttcatc
aagtccggcctgatcaccggcggcgaagacttcaaggtgcaggcggcaatgctgcgcaaa
gtgccggacatcctcatcggcaccccggggcggatgatcgagcaactcaatgccggcaac
ctcgacctgaaagaagtcgaagtgctggtcctcgacgaagccgaccgcatgctcgacatg
ggcttcgccgaagacgtgcagcgtctggtcgatgagtgcccgaaccgtcagcagaccatg
ctgttctccgcgaccaccggcggttccggcctgcgcgaaatgatcgccaaggtcctgaac
aaccctgagcacctgcagctcaacgcggtcagccagctcaactcgacgactcgccagcaa
atcatcaccgccgaccacaatcagcacaaagagcagattgtgaactggctgctggccaac
gagacctaccagaaggccatcgtcttcaccaatacccgcgccatggccgaccgcatctac
ggccgcctcgtggcccaggaatacaaagcgtttgtgctgcacggcgagaaagaccagaag
gatcgcaaactggcgatcgatcgtctgaagcagggcggtgtgaagatcctcgtcgccact
gacgttgcggcccgtggtctggacgtcgacggtctggatctggtgatcaacttcgacatg
ccacgcagcggcgacgagtacgtgcaccgcatcggtcgtaccggccgtgccggcaacgat
ggcctggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctgaagcaaagcttcgagcgccgcacgatcaaggaagtcaaaggcacctacggcggg
ccgaaaaaggtcaaggcctcgggcaaagccgtcggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaagaaaaccgccgccaagacgccgaccaagcgcaagagcgtcaaccgt
ccaaagccggattctctggtgagcagcgacggcatggccccgctcaagcgtcgcaagcca
gcagaacctgcggctgagtaa
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