Pseudomonas siliginis: NF676_07675
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Entry
NF676_07675 CDS
T08569
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psii
Pseudomonas siliginis
Pathway
psii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NF676_07675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_07675
02044 Secretion system [BR:
psii02044
]
NF676_07675
Transporters [BR:
psii02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NF676_07675
Secretion system [BR:
psii02044
]
Type I secretion system
Adhesin protein transporter
NF676_07675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_33
AAA_29
AAA_22
RTX
DUF87
nSTAND3
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UST81191
LinkDB
All DBs
Position
complement(1609591..1611750)
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AA seq
719 aa
AA seq
DB search
MTSMEPGATGVDPRLSFDDPLLDGLLILCKLHGATVSRASLSAGLPLNKQRLSLDLLPRA
AARAGLQARLLRRELKDISPLNLPILLLLNDGRTAVLRRFGEDGKALLLPSEADGGEQWV
SREELGEHYSGQALFARPRHELEDLRAPLVPRVNAWFRDTLKLSKWLYSDAILASFLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLSIGLLIGTGFELVLRVVRAHLLDTAGKKTDVI
LSATLFERITGMSMKARPATIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFVVLMLVVIG
LLGGWLVVIPLLAFPITIIFAMVIQVRLRDTVQKSLSLGAERQAVLIETLGGLETLKACG
AESERQHKWESTHGALTRLDSHARNLSALATNGTLFIQQFSGMATIVAGVYSIIAGNLSV
GALVATYMLGSRVLAPLGQIAGLITRYQQAQLTMKSTDALMALPQERDGKQRPLERTQLQ
GALDVSGVTFHYNGQNAPALSEVSFSLKAGERVGIIGRSGSGKSTLARLVMGFYEAEEGQ
LLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYISDSRMLEVAELTGVT
ELARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPIMLLDEPTSAMDNSSEDALR
QKLHGWVQGKTLLLVTHRTSMLSLVDRLLVLDNGRVVADGPKEAVIEALRKGRVGSAAV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatggaacccggcgccaccggggtcgatccgcgcctgagcttcgacgacccg
ttactcgacggcctgctgatcctctgcaaactgcatggcgccacggtcagtcgtgccagc
ctgagcgccgggctgcccctgaacaaacaacgcctgagcctcgatctgctgccccgtgca
gcagcgcgggccggattacaggcgcgcttgttgcgccgtgaattgaaagacatttcaccg
ctgaacctgccgatcctgctgctgctcaacgacggccgcaccgctgtgctgcggcggttt
ggcgaggatggcaaagccctgctgctgcccagcgaagccgacggcggcgagcaatgggtg
agtcgcgaagagcttggcgaacactacagcggccaggccttgttcgcccgcccgcgccac
gaactcgaagacctgcgcgcgccgctggtgccacgggtaaatgcgtggtttcgcgacact
cttaaactgtcgaaatggctgtacagcgatgcgattctcgccagttttctgatcaatttg
ctcggcctgatggtgccgctgttcgtcatgcagacctacgatcgcgtggtgcccaatcag
gcgacctcgacgctgtgggtgctgtcgatcggtttgctgatcggcaccggttttgaactg
gtgctgcgcgtggtccgtgcgcacctgctcgacaccgccggcaagaaaaccgacgtgatc
ctctcggcgacgttgttcgagcgcatcaccggcatgtcgatgaaagcgcggccggcgacc
attggcggctttgcccagagcattcacgacttccagggcctgcgtgaatttctcactgcc
gtgaccctgaccagcctgatcgacttgccctttgtggtgttgatgctggtggtgatcggc
ctgctcggcggctggctggtggtgattccactgttggcgtttccgatcacgatcattttc
gccatggtgattcaggtgcgcctgcgtgacaccgtgcaaaaaagcctgagcctcggcgcg
gagcgtcaggcggtgctgatcgaaaccctcggaggcctggaaaccctcaaggcctgcggc
gccgaaagcgagcgtcagcacaaatgggaaagcacccacggcgccctcacccgcctcgac
agtcatgcgcgcaacctgtcggcgctggccaccaacggcacgctgttcatccagcagttt
tccgggatggcgacgattgttgccggggtctacagcatcattgccggcaacctcagcgtc
ggcgcgctggttgccacttacatgctcggcagccgcgtgctcgccccgctcggccagatc
gccgggctgatcacccgctaccagcaagcgcaactgacgatgaaaagcaccgatgcgctg
atggccctgccgcaggaacgcgacggcaaacaacggccactggaacgcacgcagctgcaa
ggcgcactggacgtcagcggcgtgacgtttcactacaacggccagaatgcgccggcgctg
agcgaagtcagcttcagcctgaaagccggcgagcgggtcggcatcatcggccgcagcggt
tcgggcaaaagcacgttggcgcggctggtcatgggcttttatgaagcggaggaaggccaa
ctgctgctcgacggcctcgacctgcgccaactggacgtggctgacctgcgccagcagata
ggttatgtcgcccacgacctgccgctgctggctggcagcctgcgcgacaacctgaccctg
ggcgcgcgttacatcagcgactcacgcatgctcgaagtcgccgaactcaccggcgtcact
gaactggcccggcaacacccgcaaggtttcgaccgaccggtgggcgaacgcgggcaattg
ctttccggcggccagcgccaggcggtgttgctggcgcgcgcgttactgctcgatccaccg
atcatgctgctcgacgaacccaccagcgccatggacaacagcagcgaagatgcgctgcgg
cagaaactgcatggctgggtgcaaggcaaaaccctgctgctggtcacccaccgcacctca
atgctgagcctggtggaccggttgctggtgctggacaacggccgggtcgtcgctgacggc
ccgaaagaagcagtcatcgaagcgctgcgcaagggccgtgtcggctcggcggcggtctag
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