Pseudomonas siliginis: NF676_07715
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Entry
NF676_07715 CDS
T08569
Name
(GenBank) peptidoglycan-binding protein LysM
Organism
psii
Pseudomonas siliginis
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Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
Spc29
SlyX
ResB
TM_ErbB1
Motif
Other DBs
NCBI-ProteinID:
UST81199
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Position
1629394..1631196
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AA seq
600 aa
AA seq
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MLASRHMLRGGAKWLLLAGVFSYSTWSMALGLGEITVHSALNQPFKADIALVDVGTLTQN
DLSASLASADEFGRAGVERVFFLNDLKFTPILRGSRQMIRVTSGKPVNEPFLNFLVQLDQ
PNGRLLREYTVLIDPPGSPGIVPATDEPDPRPQSSEFPTVEPVTAPPQAAQGKRPATPVP
PTPAPPANDAQAEQLAASVLLTQQLQKTLDEQNLRLQEQQVQIADGKKQIEDLQTRLAEV
QKAPPPPVVAPVPAAVSAPVEAADDGVNWPLLGGLLLLLGVLAALLIRRRQQGSTADGTP
MPLLPVSAEDNVDEPELQQSVGAHAAADHRDEPGAGDVLEAVGIYLAYGRLSEAAGLLRD
ALHKEPERTDLGLQLLEVLGRQGDSAAYEQQENRLRALGVDERELIETRARHPKLAGAAP
AAFAATPIAPELPVATAATAAAPLASSPGALEDDFELNLGELSMDSNWDLNDSRTDSAAP
PIDDPELGTSLSVLPVDFDLPQAASAEEAELEWIPEPDAQPLDDDFLNEFGDPEPSLVLE
PLDLQPPESTDIESSGKLEQAQTCIDDGDIDSAIALLNELLREGDEPLKQTARTLLAGIR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaagtcggcacatgctgcgcgggggcgccaaatggctgctgctcgcgggcgta
ttcagctattcgacctggtcgatggcgttggggttgggcgaaatcactgttcactcagcc
ctcaatcagccgttcaaggccgacatcgcgctggttgatgtcggtacgttgacgcaaaac
gatctctcggccagcctggcttcggcggatgaattcggccgggcgggcgtcgagcgggtg
ttctttctcaatgacctcaagttcactccgatcctgcgcggcagccgccagatgatccgg
gtgacctcgggtaaaccggtcaacgaacctttcctgaattttctcgtgcagctggatcaa
cccaacggacgtctgttgcgcgagtacacggtgttgatcgatccgccgggttcgccgggc
atcgtgcccgccaccgacgagccggatccgcgcccgcaatcttctgagtttccaaccgtc
gaaccggttaccgcaccgccccaggctgcccaaggcaaacgccctgcgacgcctgtgccg
ccaacgccggcgccgcctgccaatgatgcgcaggccgagcaactggccgccagcgtgctg
ctcacccagcaactgcaaaagaccctcgacgaacagaacctcaggctgcaagagcagcaa
gtgcaaatagccgacggcaagaagcagattgaagatttgcaaacccgcttggccgaagtg
cagaaagcaccgccaccgcccgtggtcgctccggttccggccgctgtttcagccccggtc
gaggcggcagacgatggcgtgaactggccgctgctcggcggacttctattgctgctgggc
gtgctggctgcgttgctcatacgtcgccgtcagcaaggttcgaccgcagatggcacgccg
atgccgctattgcctgtgagcgccgaagacaacgttgatgagcctgaacttcaacaatct
gtcggtgcgcacgcggccgccgatcatcgcgacgaacccggtgccggcgacgtgctggag
gctgtgggcatctatctggcctacggccggctcagcgaagccgccgggctgctgcgcgat
gccttgcacaaggagcctgaacgcaccgatctcggtttgcagttgctggaggttcttggg
cgccagggtgacagcgccgcttacgaacagcaggaaaaccgcctgcgtgcgcttggcgtc
gatgagcgcgaactgattgaaacccgcgctcgccatcccaaactggcaggcgccgcaccg
gcggcatttgcagcaacgccaatcgcgcctgagctgcccgtggccacggcagcgaccgca
gctgcgccgcttgcatcgtcgcccggcgctctcgaggatgatttcgaattgaatctgggc
gagctgtcgatggattcaaattgggatctgaacgacagccgcaccgattccgccgcaccg
ccaatcgatgatccagagctgggcactagcttgtcagtgctgcctgtcgattttgacctg
ccacaggctgcatctgctgaagaagccgaacttgaatggatacccgaacccgacgcccag
ccgctcgacgatgactttctcaatgagttcggcgatcccgagccgtcgctggtgctggaa
cctttggatctgcaaccacccgagtccaccgacatcgagtcctccggcaagctcgaacag
gcacaaacctgcatcgacgatggcgacatcgacagcgcgatcgcgctgctcaatgaattg
ctcagggaaggagatgagccgttgaagcagacggcaaggacgttgctggcggggattcgc
tga
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