Pseudomonas siliginis: NF676_08420
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Entry
NF676_08420 CDS
T08569
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00020
Citrate cycle (TCA cycle)
psii00190
Oxidative phosphorylation
psii00650
Butanoate metabolism
psii00720
Other carbon fixation pathways
psii01100
Metabolic pathways
psii01110
Biosynthesis of secondary metabolites
psii01120
Microbial metabolism in diverse environments
psii01200
Carbon metabolism
Module
psii_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psii_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psii_M00149
Succinate dehydrogenase, prokaryotes
psii_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NF676_08420 (sdhA)
00650 Butanoate metabolism
NF676_08420 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NF676_08420 (sdhA)
00720 Other carbon fixation pathways
NF676_08420 (sdhA)
Enzymes [BR:
psii01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NF676_08420 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
NurA
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UST81335
LinkDB
All DBs
Position
1773479..1775251
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AA seq
590 aa
AA seq
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MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQEGEF
VGVIAICIETGETSYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGQDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYDDATESDIEAALSRLNALNNRTDGEDVATLRRELQSCMQNYFGVFRTGE
YMQKGIAQLADLRKRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcattattggtggtggcggtgccggc
atgcgcgctgcgctgcagctggcacagggcggccacaagactgcggtgatcaccaaggtt
ttcccgacccgttcgcacactgtgtccgcacagggcggcatcacgtgcgccatcgcttcc
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgccgtgttcgag
ctggaccacatgggtctgccgttctcgcgtaccgagcaaggccgcatctaccagcgtccg
ttcggtggccagtccaaggattacggcaagggcggtcaggctgcacgtacctgcgctgca
tccgaccgtaccggtcacgcgctgctgcacaccctttatcagggcaacctgaaagccggt
accacgttcctcaacgagtactacgctgttgatctggtgaaaaaccaggaaggcgaattc
gttggtgtgatcgcgatctgcatcgaaaccggcgaaacctcctacatccgtgccaaggcc
accgttctggccactggcggtgcaggccgtatctacgcgtccaccaccaacgccctgatc
aacaccggtgacggcgtcggcatggctctgcgtgctggcgtgccggtacaagacatcgaa
atgtggcagttccacccgaccggcattgccggcgccggtgtactggttaccgaaggttgc
cgtggtgaaggtggttacctgatcaacaagcacggtgagcgtttcatggagcgttatgct
ccgaacgcgaaagaccttgcaggtcgtgacgtggttgcccgttcgatggttaaggaaatc
atcgccggcaacggttgcggtccgaatggcgaccacgtaatgctcaaactcgaccacctg
ggcgaggaagtgctgcacagccgtctgccaggcatctgcgaactgtcgaagaccttcgcc
cacgttgacccggtcgttgctccggttccggttgtgccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggcgatcacccagaacgccgaaggtcaggaccag
atcatccctggcctgttcgcggtaggcgaagtggcttgcgtatcggtacacggtgcgaac
cgtctgggcggcaactcgctgctcgacctggtggtcttcggtcgcgctgccggcctgcac
ctggaaaaggcgttgaccgatggcatcgaatacgacgacgctaccgagtccgacatcgaa
gctgcactgtcgcgtctgaacgcgctgaacaaccgtaccgacggtgaagacgttgccacc
ctgcgtcgcgagctgcaaagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggcatcgctcagctggccgatctgcgcaagcgtatcgccaacgtgaag
atcaacgacaagtcgcaagcgttcaacactgcacgtatcgaagcgctggaactgcagaac
ctgctggaagtggctgaagctaccgccatcgcggccgaagtacgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgatgacgaaaactggctgtgccacaccctg
tacttcccgggtgacaagcgcgtcaccaagcgtgccgtgaacttctcgccgaagactgtt
ccgactttcgaacctaaagtccggacttattaa
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