Pseudomonas siliginis: NF676_11920
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Entry
NF676_11920 CDS
T08569
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psii
Pseudomonas siliginis
Pathway
psii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NF676_11920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_11920
02044 Secretion system [BR:
psii02044
]
NF676_11920
Transporters [BR:
psii02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NF676_11920
Secretion system [BR:
psii02044
]
Type I secretion system
Adhesin protein transporter
NF676_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_25
AAA_29
AAA_23
RsgA_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UST81991
LinkDB
All DBs
Position
complement(2541914..2544076)
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AA seq
720 aa
AA seq
DB search
MTDVSITVPEPAAAEAREDYSPWLEAVLKVARHYRLDVSPESVRLASVHSEGRVEEVVRH
MARQAGLSVKFAVFDNKSLSRWRTPLVVQLRDGQVGVLESIGETGELGICFSGDQGLQSR
MDATALAEQALRTVILRPTQPVADVRTNDYIKPYDEHWFRRIVLTDLRPYSQVMIASLVA
NLLGMAGVLFSMQVYDRVIPAESLPTLYVLFGGVMLALLFDFVMRILRLRITDVLGKRAD
LRVSDLVFGHALRLRNSARPKSTGSFISQLRELEQIRDLITSSTATALADMPFFLLFLLV
FYLIGGPLVLIPLVALVFMLLPGIIAQPRLARLANASMREAALRNAMLVESIQGLDDIKA
LQAEQRFQQQWNQYNAASADSSLRLRTLTNSLVAWTQNVQGGVFAVVIVFGAPMVIAGDL
TTGSLVAASILSSRMMGPMAQLTHVLTRWQQAKVALEGLNRIMQMPVDHPEGSQRVHLPA
IRGDYRLRQASFRYSEESSPALNNIDLSIRPGERIALLGRNGAGKSTLLQALGGAMDLSS
GETTLDGIALAHLDPADLRRDVGLLSQQARLFHGTLRDNITLGAGQASDQEIIAALTVTG
ALDFVRQLPKGMDHLVLEGGLGLSGGQRQSLLLSRLLIRQPQVLLLDEPTAALDDVTERL
LLEKLATWTQGRTLVVATHRVSVLQLVERIIVLDNGRIVIDDHRDAALARLRAPGKGVAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtcagcatcactgtccccgaacccgccgctgccgaagctcgcgaagattat
tcgccatggctggaagcggtgctcaaggtcgcccgccactatcgcctcgacgtctcgccg
gaaagcgtgcgcctggcttcggtgcacagcgaaggccgcgtcgaagaagtggttcggcac
atggcgcggcaggccggtttaagcgtgaagttcgcggttttcgacaacaagagcctgagc
cgctggcgcacgccgctggtggtgcaactgcgcgatggtcaggtcggcgtgctcgaaagc
atcggcgagaccggcgagctgggcatctgcttcagtggcgaccagggtttgcagagccgc
atggacgccaccgcgctcgccgagcaagccctgcgcacggtgattctgcgtccgacgcaa
ccggtggccgacgtgcgcaccaacgattacatcaagccctacgacgagcactggttccgg
cgcatcgtcctcaccgatctgcggccttacagccaagtgatgatcgcctcactggtcgcc
aacctgctgggcatggccggggtgctgttttccatgcaggtgtacgaccgggtgattccg
gccgagtcgctgccgaccctgtacgtgttgttcggcggggtgatgctggcgctgctgttc
gatttcgtcatgcgcatcctgcgtctgcgcatcaccgatgtgctgggcaaacgcgccgac
ttgcgcgtctccgatctggtctttggccacgctttgcgtctgcgtaattcggcgcggccg
aaatccaccggttcgttcatatcgcagttgcgcgagctggagcagatccgcgacctgatc
acctccagcaccgccacggcgctggcggacatgccgttttttctgctgttcctgctggtg
ttctatttgatcggtgggccgctggtgttgattccactggtggcgttggtgttcatgttg
ctccccgggatcatcgcgcaaccgcgtctggcgcgactcgccaatgcgtcgatgcgtgaa
gcggcgctgcgcaacgccatgctggtggaaagtattcagggcctcgacgacatcaaggcg
ctgcaggccgagcagcgtttccagcaacagtggaaccagtacaacgccgcctcggcggac
agcagcttgcgcctgcgcaccttgaccaacagcctggtggcctggacgcaaaatgtgcag
ggcggagtgttcgcggtggtcattgtgttcggcgcgccgatggtgattgccggcgacctg
accaccggcagtctggtcgccgcgtcgattctgtcgtcgcggatgatggggccgatggcg
caactgactcacgtactcacgcgatggcagcaggccaaggtcgcgctcgaaggcttgaac
cggatcatgcagatgccggtggatcatcccgaaggcagccagcgcgtgcacttgccggcg
attcgcggcgactaccgcctgcgtcaggccagttttcgctacagcgaagaatcgtccccg
gcgctcaacaacatcgacctgagcattcgccccggcgagcgcatcgccctgctcggccgc
aacggtgctggcaagtcgacgttgctgcaagcactgggcggcgcgatggatctgagcagc
ggtgaaaccactctggacggcatcgccctggcacatctggatccggccgacctgcgccgc
gatgtcggcctgctctcgcaacaggcgcgactgtttcacggcaccttgcgcgacaacatc
accctcggcgccggtcaggccagcgatcaggaaatcatcgccgcgctgactgtcaccggt
gcgctggacttcgttcggcagctgcccaaaggcatggatcatctggtactcgagggcggg
ttaggtttgtctggaggtcagcgccaaagcctgttgctgtcgcgcttattgatccgccag
ccacaagtgctgctgctcgacgaaccgaccgccgcgctcgatgacgtcaccgagcgtttg
ctgctggaaaaactcgcgacctggacccagggccgaacgctggtggttgccacgcatcgg
gtcagtgtgttgcaactggtcgagcggatcatcgttctcgacaacggccgcatcgtcatt
gacgaccatcgcgacgcggcattggcgcggctgcgcgcaccgggtaaaggagtggcggta
tga
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