Pseudomonas siliginis: NF676_14110
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Entry
NF676_14110 CDS
T08569
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psii
Pseudomonas siliginis
Pathway
psii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF676_14110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psii03021
]
NF676_14110
Transcription machinery [BR:
psii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF676_14110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_11
PhyR_sigma-like
HTH_20
HTH_IclR
HTH_28
HTH_29
HTH_DeoR
HTH_31
HTH_24
HTH_40
GerE
HTH_38
HTH_7
DUF6362
HTH_AsnC-type
MarR_2
HTH_10
SpoIIID
HVO_A0261_N
Terminase_5
DUF8101
HTH_22
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
UST77311
LinkDB
All DBs
Position
3041287..3041805
Genome browser
AA seq
172 aa
AA seq
DB search
MRSDETLGTADPGLLYRTHFSWLQGWLIRRIGCRDNAADLAQDTFVRVLKHRHQSGALRE
PRAYLSSIARGLMIDQYRRRELERAYLESITLLPQHEVPSEENRLMILDALERIDRLLDS
LKPRVRQAFLFARLDGLTCAQIAEKLGVSRATVERDLATALQHCYRLRYVEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcgacgaaacactaggtactgcagatccagggctgctctatcgcacccacttc
tcgtggttacagggctggctgattcggcgcatcggctgtcgcgacaacgccgcagatctg
gcgcaggacactttcgtccgtgtgctcaaacaccgtcatcagtccggcgccctgcgcgaa
ccacgtgcttatttgagcagcattgcccgagggttgatgattgatcagtatcgtcgtcgc
gaactcgaacgcgcctacctggaaagcatcacgttgctgccgcaacacgaggttccctcg
gaagaaaaccggctgatgattcttgatgcgctcgagcgcatagaccgtctgctcgactcg
cttaaaccaagagtacgccaggcgtttttatttgcccgactcgacggtctgacctgcgcg
caaatcgccgaaaagctcggtgtttcccgcgcgacggtggagcgcgatctggccacggcc
ctgcaacattgctatcgcttgcgttatgtcgaggcctga
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