Pseudomonas siliginis: NF676_15400
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Entry
NF676_15400 CDS
T08569
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_15400
DNA repair and recombination proteins [BR:
psii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF676_15400
Archaeal homologous recombinant proteins
NF676_15400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
Vps5
Snapin_Pallidin
ABC_tran
nSTAND3
MMR_HSR1
cobW
RsgA_GTPase
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UST77556
LinkDB
All DBs
Position
3355237..3358878
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NTAQQHMKAQQAQLKQLEQQHGWLKDLRQLQDAQKAASEQLQTAQQQWQALAGERVKLTR
LEQLGPQRHQFARKAELDALLTPLTTQIAAHTQQHAALGERQTQLAQNLDTAKVALSEAQ
QRQSENAPLLRQAFEEQSTLARLIKDTASSAEARQTAEQAFKDGQSAIQALQEKQAEVAE
RLQRIATELEQSAHLAPLSDAWSAYRDRLQQLMLIGNRMNKGQSELASLEQNAARSAEQL
ASHKQQLEVLFKEAGAEPDAVAEQIGLLGTLLQDNRKQLRAVEDLSRLWASQQDLDKRSA
ELQQRQLDAQQQRERLTQDGVKTKAELTVAEQTLNVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQANAQQVVDQLKEKLIELRGEVGGVIAQ
QKELLQQQEQLAAQQQALAPSLDAHPLAAQLFNQDADKRDAWLSRQNEQLNQSITQDEQR
QSALLTLQQDAARLSQQLRQAEVAHQQAAQQLSHQQHELNSDRQRLEEELSAFGPLLPAD
TLEALRLEPAATFMQLDRQIGERLAQLEQQKEELSEQQQRQQTLEKEQDRQQLRTQQLHS
AEQQFTALTEQQQSCQEKLAQLLGEHSSAEHWQQQLEHAVEQARVAETSTAEELQSVRTQ
LVQIAAELKSQQDRLQALEAEEQALAGKIADWRASHPELDDSGLEDLLRFDDAQVADLRQ
TLQHNEKAIEQAQVLLQERDQRLLDHQARQDGNLDAEQLDSALAELQNQFAVSEQQCAEL
RAEQAEDQRRQNANQALARQIADAYAEYQRWARLSALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccattcgcttgaaaaacctcgcctcgctggccggtccgttcgagatc
gatttcaccgccgaaccgctggccagcgctggtctgtttgcgatcaccggccccacaggc
gctggtaagagcacgttgcttgatgcgttgtgtctggcgctgttcggcgccgtgccgcgc
ctgaacaacaccggtcgcgatgccaaagtccccgacgctgacggtgaaatcgccactggt
gacccgcgcaccttgctgcggcgtggcacgggtgaaggctatgccgaagtggatttcgtc
ggcgtcgatggccgccgctatcgcgcgcgctgggaagccaatcgtgctcgcgagaaggct
ggtggcaaactccaggccagtcggcagagcctgcgcgacatcgatcaggatcaactgctc
gccagccagaaaggcgaatacaaaacccagctggaagccgcgctgggcctgaactttgaa
cagttcactcgcgctgtgctgctggcgcagagtgagttcagcgcgttcctcaaggctgac
gacaacgaccgcagtgaactgctggaaaaactcacagacaccgcgctctacacccgcctc
ggccgccgcgctttcgacaagaccaaagaagcccgcgaagcgcacaagctgttgcaggat
caggctaccggggtaacgcctttggcgccggaagcgcgcgccgaactcgacgagcgtttc
aacaccgcgcagcaacatatgaaggcgcaacaggcgcagctcaaacagcttgagcaacaa
cacggttggctgaaggatttgcgtcagttgcaggacgcgcaaaaagccgccagcgaacaa
ctgcaaaccgcgcaacagcaatggcaggcactggccggcgagcgggtgaagctgacgcgt
ctggaacagcttggcccgcaacgccatcagttcgcgcgcaaggccgagcttgatgcgctg
ctgacgccactgacgacgcagattgccgcgcacacccaacaacacgccgcgttgggcgaa
cgccagacgcaactggcgcaaaacctcgatacagcaaaagtcgccctcagcgaagcacaa
caacgccagagcgaaaacgcgccgttgctgcgtcaggcattcgaagagcaaagcaccctc
gcccgtctgatcaaggacactgccagcagcgccgaagcccgacaaaccgccgagcaagcg
ttcaaggatggccagagcgcgattcaggccttgcaggaaaaacaagctgaggtcgccgag
cgtttgcaacgcatcgccaccgagcttgagcagagtgcgcatctggcgccgttgagcgat
gcctggagcgcctatcgcgaccgtctgcaacagctgatgctgatcggcaaccgcatgaac
aagggccagagcgaactggcgtccctcgaacagaacgccgcgcgcagtgctgagcaactg
gcctcgcacaagcagcaactggaagtgctgttcaaagaggccggcgccgagcccgacgcg
gttgcggaacagatcggcctgctcggcactttgctgcaggacaaccgcaaacagctgcgc
gcagttgaagacctgtcgcgcctgtgggcgtctcagcaggatctcgacaagcgcagcgcc
gagttgcaacaacgtcagctcgacgcgcagcagcaacgcgaacgcttgacccaggacggt
gtgaaaaccaaggccgaactgaccgtcgccgagcagaccctcaatgtcactcgcgaactg
ctcgagcgtcagcggctggcgcgcagtgccagtgtagaagagttgcgcgcgcagttgcag
gacgatcagccctgcccggtctgcggcagcaacgagcatccctatcatcagcccgaagcg
ctgttgcaaagccttggccgtcacgatgaaagcgaacaggccaacgcccagcaagtggtc
gatcagctcaaggaaaaactgatcgagctgcgcggcgaagtcggtggcgtgatcgcgcaa
cagaaagagctgctgcagcaacaggaacaactggcggcgcagcaacaagccctggccccg
agcctcgacgcgcatccgctggccgcgcaactgttcaatcaggacgctgacaaacgcgac
gcctggctcagccgccagaacgagcaattgaaccagagcatcactcaggacgaacaacgg
caaagcgccctgctcaccttgcaacaggacgcggcgcgcttgtcgcaacaattgcgtcag
gccgaggtggcgcatcagcaagcggcgcaacagctgagccatcagcagcatgaactcaac
agcgaccgtcagcgccttgaagaagaactcagcgcgttcggtccgctgctgccggctgac
actctcgaagcactgcgcctggagccggccgcgacattcatgcagctggatcggcagatc
ggcgagcgtctggcccagcttgagcagcaaaaggaagagctgagcgaacagcagcaacgc
cagcagacgttggagaaagaacaggatcgccaacagctgcgcactcagcaactgcacagc
gccgagcaacaattcaccgcgctgaccgagcagcagcaaagctgtcaggaaaagctcgcg
cagttacttggcgagcacagcagcgccgagcattggcagcagcagctggaacatgcggtg
gaacaggcgcgcgtcgccgaaaccagcaccgctgaggagctgcaaagcgtgcgcacgcag
ctggtgcagatcgcagccgaactcaagtctcagcaggatcgcctgcaagcattggaggct
gaagaacaggcactcgccggcaagatcgccgattggcgcgccagccacccggaactggat
gacagcggcctggaagacttgctgcgcttcgacgacgcgcaagtcgccgacctgcgtcag
acccttcagcacaacgaaaaagccatcgaacaggcccaggtcttgttgcaagagcgcgat
cagcgcctgctcgatcaccaggcccggcaggacggcaatcttgacgccgaacagctggac
agcgccctcgccgagctgcaaaaccagttcgccgtcagcgaacagcagtgcgccgaactg
cgcgccgaacaggcggaagaccagcgccgacagaacgccaatcaggcgttggcccggcag
atcgctgacgcctacgccgagtatcaacgctgggcgcgactcagtgccttgatcggctca
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcac
cacgccaacgcgcagctgcgccaactggtcaaacgctatcgcctcaaacgtggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgacgaactgcgctcggtgcattcg
ttgtcgggcggcgagacgttcctcgtctcgctcgcccttgcgctgggtctggcttcgatg
gcgtcgagcacgctgaaaatcgaatcgctgtttatcgacgaaggtttcggcagccttgat
ccggaatccttgcaactggccatggacgcgctcgatggcttgcaggcgcagggacgcaag
gtggcggtgatttcccatgtgcaggaaatgcacgaacggattcctgtgcagattcaggtg
cggcgccaaggcaatggtttgagcacgctggaggtgaaatga
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integrated database retrieval system
