Pseudomonas siliginis: NF676_17100
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Entry
NF676_17100 CDS
T08569
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psii
Pseudomonas siliginis
Pathway
psii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF676_17100 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_17100 (xthA)
Enzymes [BR:
psii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NF676_17100 (xthA)
DNA repair and recombination proteins [BR:
psii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NF676_17100 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UST77884
LinkDB
All DBs
Position
3741227..3742039
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEDIRALGYHVHFHGQK
GHYGVALLSRNEPIAIHKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP
TKFPAKERFYSDLQALLESQFHNEQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF
LPEEREWMARLKNWGLTDSYRHLNPDVSDMFSWFDYRSRGFEDEPKRGLRIDVILASHGL
LPRVKDAGVDYELRGMEKPSDHAPIWLELA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtttccttcaacatcaacggactgcgtgcccgtccgcatcagctggcagcg
ctgatcgaaaaacatcagcccgacgtgatcggcctgcaggaaaccaaggtccacgacgac
cagttccccctcgaagacatccgcgccctcggctaccacgtgcacttccatggccagaaa
ggtcattacggggtcgccctgctctcgcgcaacgaaccgatcgccatccataaaggcttc
gccaccgatgaagaagacgcgcaacggcgctttatctggggcacttttgccgatgccaac
ggcgtgccggtgacgatcatgaacggctatttcccacaaggtgaaagccgcgatcaccca
accaaattccctgccaaagagcgtttctacagcgatctgcaagcgctgctggaaagccag
ttccacaacgaacagccgctggtggtgatgggcgatgtgaacatttccccggaagactgc
gacatcggcatcggcccggacaacatgaagcgctggctgaaaaccggcaaatgcagcttc
ctgccggaagaacgcgagtggatggcgcgcctgaaaaactggggcctgaccgacagctac
cgtcacctcaatcccgacgtgagcgacatgttcagctggttcgactaccgcagccgtggc
tttgaagatgagcccaaacgcggcctgcgcatcgatgtaattctggcgtcccatggcctg
ctgccacgggtcaaggatgccggcgtggactacgaactgcgcggcatggaaaagccatcg
gaccatgcgccgatctggcttgagctggcctga
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