Pseudomonas siliginis: NF676_18070
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Entry
NF676_18070 CDS
T08569
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00300
Lysine biosynthesis
psii00470
D-Amino acid metabolism
psii01100
Metabolic pathways
psii01110
Biosynthesis of secondary metabolites
psii01120
Microbial metabolism in diverse environments
psii01230
Biosynthesis of amino acids
Module
psii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NF676_18070
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NF676_18070
Enzymes [BR:
psii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NF676_18070
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UST78066
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All DBs
Position
complement(3922263..3923243)
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AA seq
326 aa
AA seq
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MTTFYDARGNIYGVVSPQALREAGIALPTSADACAASRQHWSEAAIALCCDWPEGQRPAN
GKPHRSDGLLIGPFQASAPFDVLIVNTDGSLAERSGNGLTIFSQALTEQGLMPEQGAMLR
VHHDKGEALETAVTPAEVEGVRGFWLDLGQPKFGPEVVGAHTVESVQFNNRDVSHVQPLA
QLDPDWERSQFVRIGNPHCVTLLSDPAMLPSNEQMLESPLNERLTAIAYAMPTGAGNPCP
AGVNLQWAALASPQQILARVFERGEGPTASSGTSASAVACAAWRVGWVEAGEVRVVMPGG
TAPVLLEVSQGELLRVRLFGTARLMD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgttctacgacgcacgcggcaatatctacggagtggtctcaccccaagccttg
cgcgaggccggaatcgcgttgccgacaagcgccgacgcctgcgccgcatctcggcagcac
tggagcgaagccgctatcgccctgtgctgcgattggccggaaggccagcgtccggccaac
ggcaaaccccaccgcagtgacggcctgctgatcggcccgtttcaggcatctgcgccgttc
gatgtgctgatcgtcaacaccgacggcagtctcgccgagcgcagcggtaacggtctgacg
attttttctcaggccttgaccgagcaaggcttgatgccggagcagggcgccatgctgcgc
gttcatcatgacaagggcgaagcgctggaaacggcggtgacaccagccgaagtcgaaggc
gtgcgcggtttctggctcgacctcggtcagcccaaatttggcccggaggttgtgggtgcg
catacggttgaaagcgttcagttcaacaatcgcgacgtcagccatgtccagcccctggca
caactcgatcctgactgggagcgcagccagttcgtacgcatcggcaatccgcattgcgtg
acgctgctaagcgatccggccatgttgccgagtaacgagcagatgcttgaatcaccgctg
aacgaaaggctgacggcaattgcctatgccatgcccaccggtgccggcaatccctgcccg
gcgggcgtcaatctgcaatgggccgcgctggcgtcgccgcagcaaatcctcgcccgggta
ttcgaacgtggtgagggaccgaccgcgtcatccggcaccagcgccagcgcagtggcgtgt
gctgcgtggcgggtgggttgggtcgaggcgggtgaagtgcgggtggtcatgccgggtggc
accgcaccggttttgcttgaggtttcgcaaggggagttgctgcgcgtcagattgtttggc
acggcgcggttgatggattga
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