Pseudomonas siliginis: NF676_18495
Help
Entry
NF676_18495 CDS
T08569
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psii01011
]
NF676_18495
Enzymes [BR:
psii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NF676_18495
Peptidoglycan biosynthesis and degradation proteins [BR:
psii01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NF676_18495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
UST78147
LinkDB
All DBs
Position
4019016..4020944
Genome browser
AA seq
642 aa
AA seq
DB search
MRSRLFSVLSCLFLTAAAAQSVQAVDLSTQRQYYDEAKRALAKGDTGPYFRYSQALADYP
LEPYLAYDELTARLKTASNAEIEKFLAEHGDLPQANWMKLRWLRWLADRGDWATFVKYYD
PKLNFTELDCLNAQYQISHDKKAEGYANAEKLWLTGKSQPAACDALFGIWAADGQLTEQK
RWERTKLAAQARNYPLANSLINGLTTLAPRGRLLVDVAQKPELLNQPSRFSPADEPMSDV
VSLGLRRLARQDPDKAMALLDGYASSMHFSRDEKVAIAREIGLTLARRFDSRALDVMTKY
DPELRDNTVSEWRLRLLLRLARWNDAYELTKRLPQDLATTNRWRYWQARSLELAEPQNPQ
ALTLYKNLARERDFYGFLAADRSQSPYSLNNKPLVLSQALINKVRNTPGVRRALEFHARG
QIVDGRREWYHVSRHFNRDEMVAQAKLAYDLKWYFPAIRTISQAQYWDDLDIRFPMAHRD
TLVREAKVRGLHSSWVFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFSIPLAS
PQQVLDPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLRGADHLSFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgccttttcagtgttttgtcctgcttgtttcttaccgccgctgccgctcaa
tccgtccaggcggtggacttgtccacccaacgccagtattacgatgaagccaagcgcgcc
ttggccaagggtgataccggcccgtatttccgttacagccaggcgctggccgattatccg
ctggaaccgtatctggcctacgacgaactgaccgcgcgtctgaagaccgcgagcaacgca
gaaatcgagaaattcctcgccgaacacggtgacctgccgcaggccaactggatgaagctg
cgctggttgcgctggctcgccgatcgtggcgactgggcgaccttcgtcaagtattacgat
ccgaagctgaatttcaccgagctcgactgcctcaacgcgcagtaccaaatcagccacgac
aagaaggctgaaggctatgccaacgcagaaaaactctggctgaccggcaaatcgcaaccc
gccgcctgtgacgcgctgttcggcatctgggctgccgacggccagcttaccgagcagaaa
cgctgggagcgcaccaaacttgctgcgcaggcacgcaactatccgctggccaacagtctg
atcaacggcctgaccaccctcgccccgcgcggtcgtttgctggtcgacgtggcgcagaaa
cccgaattgctcaatcagccgtcgcgcttcagcccggccgacgagccgatgtcagacgtc
gtcagcctcggcttgcgccgcctcgctcggcaggatccggacaaggccatggctttgctc
gacggttacgccagcagcatgcatttctctcgcgatgagaaggtcgcgatcgctcgcgag
atcggcctgaccctcgcgcgccgcttcgacagccgcgcgctggacgtgatgaccaaatac
gatccggagctgcgcgacaacaccgtctcggaatggcgcctgcgcctgctgctgcgtctg
gcacgctggaacgatgcctacgaattgaccaaacgtctgccgcaagacctggccaccacc
aaccgttggcgctattggcaggcgcgcagtctggagctggccgagccacaaaacccgcaa
gcgctgaccctgtacaagaatctggcgcgggaacgagacttctacggcttcctcgccgca
gaccgttcacagtcgccttactcgctgaacaacaagccgctggtgctcagccaggcgttg
atcaacaaggttcgtaacacccccggcgtgcggcgcgcgctggagtttcatgcacgcggg
cagatcgtcgacgggcgtcgcgagtggtatcacgtcagccgtcatttcaaccgcgatgaa
atggtcgcccaggccaaactggcctacgacctgaaatggtacttcccggcgattcgcacc
atcagtcaggcgcagtactgggacgacctggacatccgcttcccgatggcgcaccgcgat
accctcgtgcgtgaagccaaggttcgcggcctgcattcgagctgggtgttcgccataacc
cggcaggaaagcgccttcatggacgacgcgcgctccggcgtcggcgccagcggtctgatg
caattgatgcccggcaccgccaaggaaaccgcgcgcaagttcagcattccattggcctcg
ccccagcaagtgctcgatccagacaagaacattcagctcggcgccgcttacctcagccag
gtgcacagccagttcaacggcaaccgcgtgctcgcctccgccgcttataacgccgggcca
ggccgcgtgcgtcagtggctgcgcggcgctgatcacctgagtttcgacgtctgggtggaa
agcatcccgttcgacgaaacccgtcaatacgtgcagaacgtgttgtcctactcggtgatc
tacgggcaaaagctcaactcgccgcaaccgctggtggattggcatgagcggtattttgac
gatcagtaa
DBGET
integrated database retrieval system
