KEGG   Pseudomonas siliginis: NF676_18550
Entry
NF676_18550       CDS       T08569                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
psii  Pseudomonas siliginis
Pathway
psii00550  Peptidoglycan biosynthesis
psii01100  Metabolic pathways
psii01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:psii00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NF676_18550 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    NF676_18550 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:psii01011]
    NF676_18550 (mrdA)
Enzymes [BR:psii01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     NF676_18550 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:psii01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   NF676_18550 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: UST78158
LinkDB
Position
complement(4033007..4034899)
AA seq 630 aa
MPEPIPIKDHEKETRLVNKRLIACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLTITRERATDVNQELDEVINLLHLPAEDRTVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGIDVEPQFVRHYPLGAHFAHSIGYV
GRINEKEAKTLDSVEYRGTQSIGKTGIERFYEAQLHGHVGYEEVETNAQGRVLRVLKHTD
PVPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWYPGETVILGIGQGYMQVTPLQLAQATALIANKGIWNRPHL
AKSVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPSKAPGDPHV
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgcctgaaccaatcccgatcaaggatcatgaaaaagagacgaggctggtcaacaaacgc
ttgattgcctgtgctctgttcgtgttcgccatcagctgcgctttggtggtgcgcctgtac
attctccaggtcgtggaattcgattaccactcgaccatctccgaaaacaaccgagtccat
gtcctgccgataccgccgacgcggggattgatctacgaccgcaacggtgtattgctcgcc
gacaaccgtcccagctacaacctgaccatcactcgggagcgtgcaaccgacgtcaatcag
gagctggacgaagtcatcaacttgctgcacttgcctgctgaagaccgcacggtattcgac
aaggcgatgaagcaatcccggcatccatttacaccggtcacactgttttatgagctgacg
gaagagcagatcgccgtcctggcggtgaacgaatttcgcttgccgggcattgatgtcgaa
ccgcagtttgtccggcactatcctctcggcgcacatttcgctcattcaatcggttatgtc
ggtcggatcaatgaaaaggaagctaaaaccctcgactccgtggaataccgaggtacgcag
tccattggtaaaaccggtatcgagcgtttttatgaggcgcagttgcacggccatgtcggt
tacgaagaagtcgagaccaatgctcaaggccgcgtgctgcgggtgctcaagcacacggat
ccggttccaggtaaaaacatcgtccttagtcttgacgtcaaactgcaggaagccgccgaa
gctgctttgggagaccgtcgtggttcagtggtagctctcgacccgtccaccggagaagtg
ctggcgatggtcagcaatccgagcttcgatccgaatctgttcgtcaccgggatcagttcg
aaggaatattcagcgctgcgggattccatcgatcggccattgttcaaccgcgtattgcgt
ggcctgtacgccccaggctcgacgatcaaaccggaagtcgccatcgcagggctggacgca
ggcgtcgtaactccgcagacccgcgtattcgatcccggctattaccaactaccggacttc
gatcacaagtatcgcaactggaaccacagcggtgatggttgggtggacatggacgcggcg
atcatgcgttccaacgacacctacttctacgacttggcgcacaagcttggcatcgatcgt
ctgcacgactacatggcgatgttcggccttggtgaaaaagtctcgctggacatgtttgaa
gagtcccccggtctgatgccgtcgcaggcgtggaaacgcgctacacggcgacaggcctgg
tatcccggcgagacggttattctcggcatcggccagggatacatgcaggtcacaccgctg
caattggcccaggccactgccctgatcgccaataaggggatatggaataggccgcacttg
gccaagtcggtcgacggtgtagctccggttgatgagcatccaatgccaaatatcctgctt
aaagatccgcgggattgggagcaggtcaaccacggtatgcagatggtcatgcacgatgct
cgaggcattgcccgtgcggccgctgcgggggcgcaatatcgcatcgccggcaagagtggt
acggcgcaggtggtggcgatcaagcagggtgagcgttacaaccgcgagaaaacccttgag
cgccaccgtgacaacgccctgtttgtaggattcgcaccggccgagcatccgaagatcgcc
atctcggtaatgatcgagaacggcgaggcgggtggtcgtgttgccggtccagtagtgcgg
cagatcatggacgcctggttactcgatcaggatggtcaccttaaacctcaatacgctgcg
ccgagcaaagcgccgggcgatcctcacgtctga

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