Pseudomonas siliginis: NF676_18550
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Entry
NF676_18550 CDS
T08569
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00550
Peptidoglycan biosynthesis
psii01100
Metabolic pathways
psii01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NF676_18550 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NF676_18550 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psii01011
]
NF676_18550 (mrdA)
Enzymes [BR:
psii01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NF676_18550 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psii01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NF676_18550 (mrdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UST78158
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Position
complement(4033007..4034899)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLIACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLTITRERATDVNQELDEVINLLHLPAEDRTVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGIDVEPQFVRHYPLGAHFAHSIGYV
GRINEKEAKTLDSVEYRGTQSIGKTGIERFYEAQLHGHVGYEEVETNAQGRVLRVLKHTD
PVPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWYPGETVILGIGQGYMQVTPLQLAQATALIANKGIWNRPHL
AKSVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPSKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccaatcccgatcaaggatcatgaaaaagagacgaggctggtcaacaaacgc
ttgattgcctgtgctctgttcgtgttcgccatcagctgcgctttggtggtgcgcctgtac
attctccaggtcgtggaattcgattaccactcgaccatctccgaaaacaaccgagtccat
gtcctgccgataccgccgacgcggggattgatctacgaccgcaacggtgtattgctcgcc
gacaaccgtcccagctacaacctgaccatcactcgggagcgtgcaaccgacgtcaatcag
gagctggacgaagtcatcaacttgctgcacttgcctgctgaagaccgcacggtattcgac
aaggcgatgaagcaatcccggcatccatttacaccggtcacactgttttatgagctgacg
gaagagcagatcgccgtcctggcggtgaacgaatttcgcttgccgggcattgatgtcgaa
ccgcagtttgtccggcactatcctctcggcgcacatttcgctcattcaatcggttatgtc
ggtcggatcaatgaaaaggaagctaaaaccctcgactccgtggaataccgaggtacgcag
tccattggtaaaaccggtatcgagcgtttttatgaggcgcagttgcacggccatgtcggt
tacgaagaagtcgagaccaatgctcaaggccgcgtgctgcgggtgctcaagcacacggat
ccggttccaggtaaaaacatcgtccttagtcttgacgtcaaactgcaggaagccgccgaa
gctgctttgggagaccgtcgtggttcagtggtagctctcgacccgtccaccggagaagtg
ctggcgatggtcagcaatccgagcttcgatccgaatctgttcgtcaccgggatcagttcg
aaggaatattcagcgctgcgggattccatcgatcggccattgttcaaccgcgtattgcgt
ggcctgtacgccccaggctcgacgatcaaaccggaagtcgccatcgcagggctggacgca
ggcgtcgtaactccgcagacccgcgtattcgatcccggctattaccaactaccggacttc
gatcacaagtatcgcaactggaaccacagcggtgatggttgggtggacatggacgcggcg
atcatgcgttccaacgacacctacttctacgacttggcgcacaagcttggcatcgatcgt
ctgcacgactacatggcgatgttcggccttggtgaaaaagtctcgctggacatgtttgaa
gagtcccccggtctgatgccgtcgcaggcgtggaaacgcgctacacggcgacaggcctgg
tatcccggcgagacggttattctcggcatcggccagggatacatgcaggtcacaccgctg
caattggcccaggccactgccctgatcgccaataaggggatatggaataggccgcacttg
gccaagtcggtcgacggtgtagctccggttgatgagcatccaatgccaaatatcctgctt
aaagatccgcgggattgggagcaggtcaaccacggtatgcagatggtcatgcacgatgct
cgaggcattgcccgtgcggccgctgcgggggcgcaatatcgcatcgccggcaagagtggt
acggcgcaggtggtggcgatcaagcagggtgagcgttacaaccgcgagaaaacccttgag
cgccaccgtgacaacgccctgtttgtaggattcgcaccggccgagcatccgaagatcgcc
atctcggtaatgatcgagaacggcgaggcgggtggtcgtgttgccggtccagtagtgcgg
cagatcatggacgcctggttactcgatcaggatggtcaccttaaacctcaatacgctgcg
ccgagcaaagcgccgggcgatcctcacgtctga
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