Pseudomonas siliginis: NF676_18930
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Entry
NF676_18930 CDS
T08569
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
psii
Pseudomonas siliginis
Pathway
psii02020
Two-component system
psii02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF676_18930
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NF676_18930
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psii01001
]
NF676_18930
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psii02022
]
NF676_18930
Enzymes [BR:
psii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
NF676_18930
Protein kinases [BR:
psii01001
]
Histidine kinases
Other
NF676_18930
Two-component system [BR:
psii02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
NF676_18930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
IFT57
Receiver_CRE1
SMP_2
PE
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
UST78227
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All DBs
Position
4121573..4123894
Genome browser
AA seq
773 aa
AA seq
DB search
MDIKFTHRLSYKQARLTVLVGFILGTLLSLLQIGIDYASEDASINREILALLEISHNPAS
RIAYNIDAELAQELTLGLLRSPAIIAAQLIDNNDTVLASVKRPELQSSYRLISDFLFGAK
RHFEDRLYLDHLPNESLGVLKLEVDTYAFGSRFLRRAEVTLLNGFARSLLLTGILLALFY
VMLTKPLVRVIRELSGRDPRSAEPTTLECPAGHGNDEIGVLVKVANQQFENIATEIQQRR
TAENRLTEYLAQLEDIVSARTAELKAINARLSQSNEELEVARRTALDMAEARSAFLANMS
HEIRTPLNGLLGMIALSLDGPLNAEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLEL
ENIPFDLGSLIEDTANLLSQNAAPSVELTCLIEPHFPALVLGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLSAYKGGVRIEVCDTGIGIAQEAQVKIFQPFTQAGAGITRQYGGTGLGLA
LTYNLCEAMQGRLTISSESGFGSQFCAELPLPSHTRALPPIPLRGKVLAITAASSGLAEL
LKSLLPVWGLEYTQRTIDDSLLGLSPDVLITDCPECLFGLRPSITAPILLVTAYGSFLPS
EEAAALAPLQQQARPLARNALYQHLRRILQPDAATLNEAQADALPSARRGKVLLVEDNPV
NQLVAKGMLGKLGCDVVVAGHGAEALDQLEFADFDLVLMDCNMPVMDGYEASRQIRQSGR
WPNLPIVALTANAMSEERERCRAAGMSDYLAKPFRREELAALLDQWMPTTKAL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaattcacccaccggctgtcttacaagcaagccaggcttaccgtgctggtc
gggttcattctgggcaccctgctcagtctgctgcagatcggcatcgattatgccagcgaa
gacgcttccatcaaccgtgaaatcctcgcgctgctggaaatcagccacaatccggcctcg
cgcatcgcctataacatcgacgccgagctcgcgcaggagctcaccctgggcctgctgcgc
tcgcccgcgatcatcgccgcgcaactgatcgacaacaacgataccgtgctggccagcgtc
aaacgcccggaactgcagagcagctatcggctgatcagcgacttcctgttcggcgccaag
cgtcatttcgaagatcgtctgtacctcgaccacttgcccaacgaatccctcggcgttctc
aagcttgaagtcgacacttatgccttcggcagccgcttcctgcgccgtgcggaagtcacc
ctgctcaacggttttgcccgcagcctgctgctgaccgggatcctcctggcgctgttctac
gtgatgctgaccaagccgttggtgcgggtcatccgtgaactcagcggccgcgacccgcgc
agcgccgagccgaccacgcttgagtgccccgccggccacggcaacgatgagatcggcgtg
ctggtcaaggtcgccaatcagcagttcgaaaacatcgccaccgaaatccagcagcggcgc
accgcggaaaaccgcctgaccgaatacctcgcgcaactggaagacatcgtctcggcgcgc
accgccgaactcaaggcaatcaacgcccgcctcagccagtccaacgaagaactggaagtg
gcacgccgtactgcactggacatggccgaagcgcgttcggcgtttctcgccaacatgagc
catgaaatccgtacaccactcaatggtctgctggggatgatcgcgctgtcgctggacggc
ccgctcaacgccgagcagcagcaacaactgtcgatcgcccacgactcgggcaaggtgctg
gtggaactgctcaacgatattcttgacctgtcgaaattcgacgccgggcaactagagctg
gaaaacatccccttcgacctcggttcgctgatcgaagacaccgccaacctgctttcgcaa
aacgccgcgccgagcgtcgagctgacctgtctgatcgaaccgcacttcccggcgctggtg
ctgggcgacccgacccgggtgcggcagatcgtcagcaacctgctgtccaacgcgttgaaa
ttcacccgtttcggtcgggtcgatgtgcgtctgtcggcgtacaagggtggcgtgcgcatc
gaagtctgcgacaccggcataggcatcgcccaggaagcgcaggtgaaaatcttccagccg
ttcacccaggccggcgccggtatcacccgtcagtacggcggcaccgggctgggactggcg
ctgacgtacaacctgtgcgaggcgatgcagggtcggctgaccatcagctccgaaagcggc
ttcggcagccagttctgcgccgaactgccactgccctctcacacccgcgcgctgccgccg
ataccgttacgcggcaaggttctcgccatcaccgctgccagcagtggtctggcggaattg
ctgaaaagcctgttgccggtgtggggcctggaatacacgcagcgcactattgatgattcg
ctgctgggcctgagtccggatgtgctgatcaccgattgcccggaatgcctgttcggtctg
cgccctagcatcaccgcgccgattctgctggtgactgcttacggcagttttctgcccagc
gaagaagccgccgccctcgcccccttgcagcagcaagcccggccgctggcgcgcaacgcg
ctgtaccagcatctgcgacggattctgcaaccggacgccgccaccctcaacgaagcacaa
gcggatgccttgccgtccgcgcgccggggcaaggtgctgctggtcgaggacaacccggtc
aatcaactggtcgccaaaggcatgctcggcaagcttggctgcgatgtagtggtggcgggc
catggtgccgaggcgctggatcagctggagtttgccgatttcgatctggtgctgatggac
tgcaacatgccggtgatggatggctatgaagccagtcggcagattcgccagagcgggcgc
tggccgaatctgccgattgtggcgctgaccgccaatgccatgtccgaggaacgcgaacgt
tgccgcgcggccggcatgagcgactatctggccaaaccgtttcgccgcgaagaactcgcc
gcgctgcttgatcagtggatgccgactacgaaagccctttga
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