Pseudomonas siliginis: NF676_20600
Help
Entry
NF676_20600 CDS
T08569
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psii03000
]
NF676_20600
Transcription factors [BR:
psii03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NF676_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UST78541
LinkDB
All DBs
Position
4476190..4477221
Genome browser
AA seq
343 aa
AA seq
DB search
MTSPKNDKNTRTTGRPTLNEVARLAGVSPITASRALRGVSTVATELVEKVQKAALELNYV
VNPAARALASAQSHSVVVLVPSLSNLLFIDTLEAIHRVLTPKGFEVLIGNFHYSRDEEEN
LLRNYMAYQPRGFLLTGFDRTESSRRMIEASNIPCVYMMELDSAAGVNCVGFSQLSAGET
AAEHLLSRGRKRLAYIGAQLDQRTLLRGEGFRKALQKAGRYDPDLEVLTPRASSVGLGGE
LFLQLLAAHPDVDAIFFGNDDLAQGALLEALRNGIKIPEQVAILGFNDLPMSEHMVPRLS
SINTPREAIGRRAAEQMLTLMAGNKVARPMEDMGFELKVREST
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccccaagaacgataaaaatacccgcaccaccggccgtccgaccctcaacgaa
gtagcccgcctggccggcgtcagcccgatcactgcctcgcgcgccttgcgcggggtaagc
acggtggccaccgaactggtggaaaaagtgcagaaagctgcgcttgaactcaattatgta
gtcaaccccgccgcccgcgcactggcctcggcgcagagccattcggtggtggtgctggtg
ccgtcactgtccaacctgctgttcatcgacacgctggaagccattcatcgggtgctgacg
cccaaaggcttcgaagtgctgatcggcaacttccactattcgcgcgatgaagaagaaaac
ctgctgcgcaattacatggcttatcagccgcgcgggtttctgctgaccggttttgatcgc
acggaaagttcgcggcggatgatcgaggccagcaacattccttgcgtgtacatgatggag
ctggacagtgctgccggagtcaattgcgtgggtttttcacaattgagcgcgggcgaaact
gccgccgaacatctcctgtctcgtggacgcaagcgtctggcgtacatcggcgcgcagttg
gaccagcgcaccctgctgcgcggtgagggtttccgcaaggcgttgcagaaggcaggccgt
tacgacccggacctggaagtgctgacgccacgtgcttcgtcggtgggtctgggtggcgag
ttgtttttgcaattgctggcggcgcatcccgatgttgatgcgattttcttcggcaacgac
gacttggcccagggtgcgctcctggaagcgttgcgtaacggcatcaagattcccgagcaa
gtggcgattctgggtttcaacgacttgccgatgtccgagcacatggtcccgcgcctgagc
agcatcaacaccccgcgcgaggcaatcggccggcgcgcggcggagcagatgctcacgtta
atggcaggcaacaaagtggcgcgcccgatggaggatatggggtttgagctgaaggtgcgc
gagagtacctga
DBGET
integrated database retrieval system
