Pseudomonas siliginis: NF676_20655
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Entry
NF676_20655 CDS
T08569
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00061
Fatty acid biosynthesis
psii00071
Fatty acid degradation
psii01100
Metabolic pathways
psii01212
Fatty acid metabolism
psii02024
Quorum sensing
psii04146
Peroxisome
Module
psii_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NF676_20655 (fadD1)
00071 Fatty acid degradation
NF676_20655 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NF676_20655 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NF676_20655 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psii01004
]
NF676_20655 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psii04147
]
NF676_20655 (fadD1)
Enzymes [BR:
psii01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NF676_20655 (fadD1)
Lipid biosynthesis proteins [BR:
psii01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NF676_20655 (fadD1)
Exosome [BR:
psii04147
]
Exosomal proteins
Exosomal proteins of breast milk
NF676_20655 (fadD1)
Exosomal proteins of breast cancer cells
NF676_20655 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
UST78550
LinkDB
All DBs
Position
complement(4485733..4487430)
Genome browser
AA seq
565 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEAVVPKTGVKHVIVTEVADLLPPIKRLLINSVIKYVKKMVPAYH
LPKAIKFNDVLSKGHGQPVAEANPDSGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEGFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCAICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTLCKVIDDAGVEQPLGEIGELCVKGPQVMKGYWQ
RQEATDEMLDSDGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVAKPGVTLTKEQVMDHMRANVTGYKVPRSVEFRDALPT
TNVGKILRRELRDEELKKIKAKSAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtacccggctggaatcgcagccgagatcaatcca
gacgagtatccgaacattcaggcagtgttgaagcaatcctgccaacgcttcgccaacaaa
ccggctttcagcaacctcggcaagacaatcacctacggtgagctgtacgagctgtccggt
gcctttgccgcgtatctgcaacagcataccgacttgcagcccggtgatcgaatcgccgtg
caactgcccaacgtcctgcagtacccggtcgcggtcttcggtgccattcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccaattcaacgac
tccggcgccaaggccctggtgtgcctggcgaacatggcgcacctggccgaagccgtggtg
ccgaaaaccggggtcaagcacgtcatcgtcaccgaagttgccgacctgctgccgccgatc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaaaatggtcccggcctatcac
ttgcccaaagccatcaagttcaacgacgtcctgagcaaaggccacggccagccagtggcc
gaagccaatccggacagcggcgatgtcgcagtgctgcaatacaccggcggcaccaccggc
gtggccaagggcgcgatgctcacgcaccgcaacctggtcgccaacatgctgcaatgcaag
gcgctgatgggctccaacctcaacgaaggctgcgagatcctgatcacgccgctgccgctg
tatcacatctatgcgttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggtttcgtcggtctgaacacgctgttcgtggcgctgtgcaacaacgaaggtttc
cgcaagctggatttctccgcgctgaaagttaccctgtccggcggcatggccctgcaactg
gcggcggccgagcgctggaaagccgtgaccggttgcgccatctgcgaaggctacggcatg
accgaaaccagcccggtggccacggtcaacccgattcagcacatccagatcggcaccatc
ggcattccggtgccgtcgaccctgtgcaaagtcatcgacgatgccggtgtcgagcagccg
ctgggcgaaatcggcgagctgtgcgtcaaaggcccgcaagtgatgaagggctactggcag
cgtcaggaagccaccgatgaaatgctcgacagcgacggctggctgaaaaccggtgacatc
gcgctgatccagccggacggctacatgcgcatcgtcgatcgcaagaaagacatgattctg
gtgtctggcttcaacgtctatccgaacgaactggaagacgtgctggcgactttgccgggc
gtgttgcagtgcgcggcgatcggtgtgccggacgagaaatcgggtgaggcgatcaagatt
ttcatcgtcgccaaaccgggcgtgaccctgaccaaagagcaggtcatggaccacatgcgc
gccaacgttaccggctacaaagtgccgcgctcggtggaattccgcgatgcgctgccgacc
accaacgtcggcaagatcctgcgccgcgaattgcgggatgaagaactgaagaagatcaag
gccaagtctgccgcgtaa
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