Pseudomonas siliginis: NF676_20840
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Entry
NF676_20840 CDS
T08569
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psii03000
]
NF676_20840
Transcription factors [BR:
psii03000
]
Prokaryotic type
Other transcription factors
Others
NF676_20840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
AAA_5
Mg_chelatase
AAA_2
PAS
PAS_8
ACT
AAA
MLTR_LBD
AAA_16
bpMoxR
PAS_9
Motif
Other DBs
NCBI-ProteinID:
UST78586
LinkDB
All DBs
Position
4530838..4532346
Genome browser
AA seq
502 aa
AA seq
DB search
MRIHVSFIDRVGITQEVLAILGGRNLNLDAVEMIPPNVYIDAPTLSPQVLEELKDALFRV
LGVEAVTVVDILPGQRRHLQLDALLAAMTDPVLALDSAGKVLLANPALIALYGREPAGES
VSALFNDPGLLDTLLENGFRLPLREITVNGQTLLLDATPITDAGALLTLYQPNRIGEQLS
ALHHDHAEGFDALLGESPAIRTLKARAQRVAALDAPLLIQGETGTGKELVARACHAISAR
HSAPFLALNCAALPENLAESELFGYAPGAFTGAARGGKPGLMELANQGTVFLDEIGEMSP
YLQAKLLRFLNDGSFRRVGGDREVKVNVRILSATHRDLEKMVSEGLFREDLFYRLNVLNV
EVPPLRERGQDILLLARYFMQQACAQIQRPVCRLAPGTYPALLGNRWPGNVRQLQNVIFR
AAAICESSLVDIGDLDIAGTSVARQSDTEVESLEQAVESFERALLEKLYVSYPSTRQLAS
RLQTSHTAIAHRLRKYGIPNKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccacgtcagcttcatcgaccgcgtcggcatcacccaggaagtcctggctatc
ctcggtgggcgcaatctcaatctggatgcggtggagatgatcccgccgaacgtctacatc
gacgcgccgaccctcagcccgcaagtgctcgaagaactcaaagatgcgctgtttcgcgtg
ctcggcgtggaagcggtgaccgtggtcgatatcctccccggccagcgccggcacttgcag
ctagatgccctgctcgcggcgatgaccgacccggtgctggccctcgacagcgccggcaag
gtgctgctggccaacccggcgttgattgccctgtacggtcgcgaaccggccggtgaaagc
gtctcggcgctgttcaatgatcccggcctgctcgataccctgctggaaaacggctttcgc
ctgccgctgcgcgagatcaccgtcaacggccagaccctgctgctcgacgccacgccgatc
acagacgccggcgccctgctgaccctgtatcaaccgaaccgcatcggcgaacaactctcg
gcactgcaccacgatcacgccgaaggcttcgacgcgctgctcggcgagtctccggcgatc
cgcacactcaaggcccgcgcgcaacgcgtcgccgcccttgatgcaccgttgttgattcaa
ggcgaaaccggtaccggtaaagaactcgtcgcccgcgcttgccatgccatcagtgcacgg
cacagcgctccgtttctcgccctcaactgcgcggcgctgccggagaacctcgccgagagc
gaactgttcggctacgcccccggcgccttcaccggtgcggcgcgtggcggtaagccgggg
ctgatggaactggccaaccagggcacggtgttccttgatgagatcggcgagatgtcgccg
tacttgcaggccaaattgctgcgctttctcaacgatggcagctttcgtcgggtgggcggt
gatcgtgaagtgaaggtcaatgtgcgcatcctcagcgctacccaccgcgatctggaaaaa
atggtcagcgaaggcttgttccgcgaagacctgttctatcgcctcaatgtgctcaacgtc
gaagtgccgccgctgcgtgaacgcggtcaagacattttgctgctggctcgctacttcatg
cagcaggcctgtgcgcagatccagcgcccggtctgccgcctggcgcccggcacttatccg
gcgctgctcggcaatcgctggccgggcaacgtgcggcaactgcagaacgtgattttccgc
gcggcagcgatttgcgagagcagccttgtcgatatcggcgacctcgacatcgccggcacc
tccgtcgcgcgccagagcgacactgaggtggaaagtctcgaacaagcggtcgaatcgttc
gaaagggcgctgctggaaaagctttacgtcagctatccctcgacccggcaactggcgagc
cgcttgcaaacctcgcacaccgccatcgcccatcgcctgcgcaaatacggcattcccaat
aaaccctga
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