Pseudomonas siliginis: NF676_20930
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Entry
NF676_20930 CDS
T08569
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psii
Pseudomonas siliginis
Pathway
psii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NF676_20930 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_20930 (ruvB)
Enzymes [BR:
psii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF676_20930 (ruvB)
DNA repair and recombination proteins [BR:
psii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF676_20930 (ruvB)
RecFOR pathway proteins
NF676_20930 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
TIP49
AAA_16
AAA_14
nSTAND3
AAA_17
RNA_helicase
AAA_2
Rad17
AAA_28
ABC_tran
AAA_18
NTPase_1
AAA_24
NB-ARC
TsaE
RsgA_GTPase
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UST78601
LinkDB
All DBs
Position
complement(4548748..4549809)
Genome browser
AA seq
353 aa
AA seq
DB search
MIEADRLIAAAHSPREREEVQDRAIRPVSLADYIGQPTVREQMELFIQAARGRSESLDHT
LIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRL
SPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV
QRLEFYSTADLATIVSRSAAILGLPLDPEGSFEIARRARGTPRIANRLLRRVRDFAEVRA
KGHITKAVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGIDSLAAAISEERHTIE
DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNVPSRMGEMPVADEFLDAVDD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagctgatcgtctgatcgccgccgcgcacagcccgcgcgagcgcgaagaagtc
caggatcgggccatccgcccggtcagcctggccgactacattggccagccgaccgtgcgc
gagcagatggagctgtttatccaggccgcccgtggccgcagcgaatccctcgatcacacc
ctgatcttcggcccgccggggctgggcaagaccacgctggcgaacatcattgcccaggaa
atgggcgtgtcgatcaagagcacctccgggccagtgctggaacgcccgggtgatctggcc
gcgttgctgaccaatcttgagccgcacgatgtgttgttcatcgacgaaatccatcgtctg
tcgccgatcgttgaagaagtgctgtacccggcgatggaagattttcagctcgacatcatg
attggcgaggggccggcggcgcgttcgatcaaactcgatctgccgcctttcactctggtc
ggcgccaccacccgcgccggcatgctgaccaatccgttgcgtgatcgcttcggtatcgtc
cagcgcctggagttctacagcacggcggatctggcaacgatcgtcagtcgttcggcggcc
attctcggtctgccgctggatccggaaggttcgttcgagatcgcccgtcgcgctcgtggc
acgccgcgaattgccaaccgtctgctgcggcgggtgcgcgatttcgctgaagtacgcgcc
aagggccacatcaccaaagcggtggcggatctggcgctgaacctgctggacgtcgatgaa
cacggtttcgatcaccaggaccggcgtctgctgctgaccatgatcgagaagttcgacggc
ggtccggttggtatcgacagtctggcggcggcgatcagtgaagaacgccacaccattgaa
gacgtgctcgaaccgtatctgattcagcagggctatatcatgcgcacgccacggggcagg
gtggtgacgcggcatgcctatttgcatttcggtttgaatgttccgtcacgcatgggcgag
atgcccgtggcagacgagtttctcgacgccgtcgacgattga
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