Pseudomonas siliginis: NF676_21040
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Entry
NF676_21040 CDS
T08569
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_21040
DNA repair and recombination proteins [BR:
psii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NF676_21040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
FtsK_SpoIIIE
TrwB_AAD_bind
AAA_10
AAA_16
AAA_30
nSTAND_NTPase5
T2SSE
CbiA
AAA_7
AAA_6
AAA_19
AAA_25
nSTAND3
Hydrolase
SRP54
Lactamase_B_4
AAA_28
AAA_5
Zot
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
UST78622
LinkDB
All DBs
Position
complement(4571381..4572868)
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AA seq
495 aa
AA seq
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MPDSSQLVIGADPAAQPIAQAMRLANRHGLIAGATGTGKTVTLQRLAEAFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIAGMPWLGHTPQAYPVTLWDIHGESGHPLRTTLSEMGP
LLIGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPQLLGEDAALMTT
GSSQALLRRLATLEQQGAEALFGEPALQLEDILQPGADGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFGDTPKALQERLEQVVRLIRSKGVG
VYFVTQSPADLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDSLSVLTEL
GIGEALVGTLTEKGTPEMVQRVLVAPPQSRIGPLTETERTVLIAGSPFKGRYDKPIDRES
AYEILMGRKGLAPEAETPAGKAAAEEPSLADRAGEFLGTAAGQALKSAMRQAANNLGKQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcctcgcaactcgttatcggcgctgatccggccgcgcaacccatcgctcag
gccatgcgcctggccaaccgccacggcctgatcgccggcgccaccggcaccggtaaaacc
gtgacgttgcagcgcctggccgaagcgttcagcgacgccggtgtggcagtgttcgctgcc
gacatcaagggcgacctgtgcggcctcggtgctgccggcaacccgcagggcaaagtggcc
gagcgcatcgccggcatgccctggcttggtcacacgccgcaggcttatcccgtcacgctg
tgggacatccacggtgaatccggtcatccgctgcgcaccaccctgagcgaaatgggtccg
ctactgatcggcagcctgctcgagctgaccgacagtcagcagtcggcgctgtacgcggcc
ttcaaggtggcggatcgcgaagggctgttgctgctggatctcaaggatctgaaagcgctg
ctcaatcacctcaaggacaatccacagttgctcggcgaagacgccgcgctgatgaccacc
ggttccagccaggcactgttgcgccggttggcgacgctggaacagcagggcgccgaagcc
ctgttcggcgagccggcgctgcaactcgaagacattctgcaaccgggcgccgatggccgt
ggacgtatccatctgctcgatgccagtcggctggtgcacgaggcgccgaaggtttacgca
acgttcctgctgtggctgctggccgagttgttcgagcaactgcccgagcgcggcgacgcc
gacaagccgctgctggcgctgtttttcgacgaggcgcacttgctgttcggcgacacgccc
aaagctctgcaagaacggctcgagcaagtggtgcgtttgattcgttccaaaggcgttggc
gtgtatttcgtcacccagtcgccggcggatctgccggatgacgtgctggcgcagttgggc
ttgcgtattcaacacggtctgcgtgcgttcaccgccaaagagcagaaatccctgcgtgcg
gttgcggatggctttcggccgaatccggcgttcgacagtctgtcggtgctgactgagtta
ggtattggtgaggcgctggtcggcacgctgaccgagaagggcacgccggaaatggtccag
cgcgtgctggtggcaccgccgcaatcgcggatcggcccgctgactgaaaccgagcgcacc
gtgctgatcgccggctcgccgttcaagggccgttatgacaagccgatcgatcgcgagtcg
gcctatgaaatcctgatgggacgcaaagggctggcgcccgaggctgaaacaccagcgggc
aaagctgcggccgaagagccgagcctggctgaccgcgctggcgaattcctcggcacggcg
gcagggcaggcgctgaaatcggcgatgcgccaggcggccaataaccttggcaagcagttg
gtgcgcgggttgatggggtcgctgctcggcggcagcaagcgccgctaa
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