Pseudomonas siliginis: NF676_21935
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Entry
NF676_21935 CDS
T08569
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psii03009
]
NF676_21935 (der)
Ribosome biogenesis [BR:
psii03009
]
Prokaryotic type
GTPases
NF676_21935 (der)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
ABC_tran
AAA_22
Ras
cobW
DUF5906
AAA_24
NTPase_1
SRPRB
AAA_18
SRP54
NOG1
Nuc_deoxyri_tr2
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
UST78794
LinkDB
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Position
complement(4796932..4798404)
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AA seq
490 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANKV
DNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALSEFPRDDDEPAEGEEEEVVAE
GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFER
NEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG
FAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYAS
VQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQI
EKVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRLMSHNK
KASKKRRDKK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgtgacgccatcgtcggcgacctgtccggtctgacccgtgatcgc
cagtacggtgaggccaagtggcaagggcgttcctacattctgatcgacaccggcggtatc
tccggtgacgaacatggtatggacgaaaaaatggccgagcagtcgctgctggccatcgaa
gaagccgatgtggtgctgtttctggtagatgccaaggccggttttaccgctgccgaccag
atgatcgccgagcatttgcgcaaacgtaacaagcgttcccacgtggtggccaacaaggtc
gacaacatcgacccggaaatggcccgcgccgaattcgccccgctgggcatgggccacgcg
atcccgatcgctggcgcccacggccgtggcatcacgcaactgctggaagccgccctgagc
gagttcccgcgcgatgatgacgagcctgctgaaggtgaagaggaagaagtcgttgccgaa
ggcgaggaagccaagcgcattcctggtccgagcgaaaaagacgggatcaagatcgccatc
atcggtcgtccgaacgtcggcaagtcgaccctggtcaaccgcatgcttggtgaagaccgg
gtcatcgtgtacgaccagccgggcaccacccgcgacagcatctacattccgttcgagcgc
aatgaagagaagtacacgctgatcgacaccgccggtgtgcgcaagcgcggcaagatccac
gaagaagtcgaaaaattctccgtggtcaaaaccctgcaggcgatcaaagacgccaacgtg
gtgatcttcgtgatggacgcccgcgagggtgtggtcgatcacgacctgaacctgctgggc
ttcgcgatcgaatccggtcgtgcgctggtcatcgcgatcaacaagtgggatggcatgacg
ccgagcgagcgcgactttgtgaaagtcgagctgcaacgtcgtctgttcttcgtcgactac
gccgacattcacttcatctcggcgttgcacggcacgggcgtgggcaacctctacgcttcg
gtgcagaactcgttcaagtccgctgttacccgctggccgaccaaccgtctgacccagatt
ctggaagatgcggtgggcgagcacgcgccgccaatggtcaacaaccgccggatcaagctg
cgttacgctcacttgggtggtgcgaacccgccgatcatcgtgatccacggtaaccagatc
gagaaagtgccgaagtcgtacgtgcgctatctggagaacacttaccgtcgtgtactcaag
ctggtcggtacgccgatccgcatcgagttcaagggcggcgagaacccgtacgaaggcaac
aagaacacgctgaccgaccgccaggtcaacaagaagcgtcgcttgatgtcgcacaacaag
aaagccagcaagaagcgccgcgacaagaagtga
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