Pseudomonas siliginis: NF676_22280
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Entry
NF676_22280 CDS
T08569
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00470
D-Amino acid metabolism
psii00550
Peptidoglycan biosynthesis
psii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NF676_22280 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NF676_22280 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psii01011
]
NF676_22280 (murD)
Enzymes [BR:
psii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NF676_22280 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psii01011
]
Precursor biosynthesis
Amino acid ligase
NF676_22280 (murD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UST78860
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Position
complement(4865650..4866996)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELATLKRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKMSGDIELFARNARAPIVAITGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDALSRPLIGEGQPCWTFGLSKPD
FKAFGIREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALTLGHAVGLPFDAMLAAL
RTFAGLEHRCQWVRDLDGVAYYNDSKATNVGAALAAIEGLGADIDGKVILIAGGDGKGAE
FNDLRDPVAANCRAVVLMGRDSDKIGAALGDAVPLIRATSLVDAVAQCRAAAQPGDVVLL
SPACASFDMFKNYEDRGHQFVRAVEELA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgctgtggccgacacgcgggaa
aatccaccggaactggccacgctcaagcgtgactatccgcacgtggaagtgcgttgtggc
gagctggacgtcgaattcctctgccgtgccgacgagctctacgtgagccccggcctggcg
ctggcgaccccggccctgcaagccgcagcagcccgtggcgtgaaaatgtccggcgacatc
gagttgttcgcgcgtaacgcgcgggcgccgatcgtcgcgatcaccggttccaacgcgaaa
agcaccgtcactactctggtcggcgagatggcggctgcggccggcaagcgcgtcgccgtt
ggcggcaacctaggcacgccggcgctggatctgctcagcgacgatgtcgagttgtacgtc
atggagttgtcgagtttccagctggaaaccaccgaccagctcaacgccgaagtcgccacc
gtactgaacatcagcgaagaccacatggatcgctacagcggtctgccagcctatcacctg
gccaagcaccggatcttccggggcgcgaagcagtttgtggtcaaccgtcaggacgcccta
agccgtccattgatcggcgaaggccagccatgctggacctttggcctgagcaaaccggat
ttcaaagcgttcggcattcgcgaagaagacggcgagaagtacctcgccttcgaattccag
aacctgatgcccgtgcgtgaactgaagattcgcggtgcgcataaccagtccaacgcgctc
gccgcattgacactgggtcacgcggtgggcctgccgttcgacgccatgctcgcggcgctg
cgcacgtttgccgggctcgaacaccgctgccagtgggtgcgcgatctcgacggcgtggct
tattacaacgactccaaagccaccaacgttggcgccgctctggccgcgatcgaaggcctc
ggtgcggacatcgacggcaaggtcattctgatcgccggcggtgacggcaaaggcgccgaa
ttcaacgatctgcgcgatccggtggcggccaactgccgcgctgtggtcctgatgggccgc
gactccgacaagatcggcgcagcccttggcgatgccgtgccgctgatccgcgcgacctcg
ctggtcgacgccgtcgcgcaatgccgcgcagctgcccagccgggtgacgtggtgctgctg
tctccggcctgcgccagtttcgacatgttcaagaattacgaagaccgtggtcaccagttc
gtccgcgctgtggaggaactggcatga
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