Pseudomonas siliginis: NF676_22585
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Entry
NF676_22585 CDS
T08569
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_22585 (phrB)
Enzymes [BR:
psii01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NF676_22585 (phrB)
DNA repair and recombination proteins [BR:
psii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NF676_22585 (phrB)
Prokaryotic type
NF676_22585 (phrB)
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Gene cluster
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UST78914
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Position
4926003..4927448
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AA seq
481 aa
AA seq
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MQLIWLRSDLRLHDNTALAAAAARGPTVAVYLLSPQQWLEHDDAPCKVDFWLRNLRELSQ
SLGALNIPLLIRSAPHWDQAPAELLKLCRHLKIEAVHANEEYGVHESRRDETVAETLRAE
GIEFHSYLDQLLFKPGTVLTKTGTYFQVFSQFRKVCYERLHRSMPALVKAPGKQAALDIA
SDAIPEAVKGFATPSESLRALWPAGEQEARRRLDTFTDAQIDYYRSERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALQSNQGEFESGKVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRDAPEELKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDAEGVFIK
HWLPELAGLNKKEVHNPAAAGGLFGVADYPAPIVNLSASRERALTAFKNLPSRQPVGGSD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcctacatgacaacacagccctcgcggcc
gccgcagcgcgcggcccgaccgtggcggtgtatctgttgagtccgcagcaatggctggag
cacgacgatgcgccgtgcaaagtggatttctggctgcgcaacctgcgcgaactgagccag
agcctcggcgcgctgaacatcccgttgttgattcgcagcgcaccgcactgggatcaggca
ccggcggagctgctcaaactctgccggcatttgaagatcgaggcggtgcacgccaacgag
gaatacggcgttcacgaaagccgccgtgatgaaaccgtggccgaaacgttgcgagccgaa
ggcatcgaattccacagttacctggatcagttgctgttcaaacccggcacagtgctgacc
aagaccggcacctacttccaggtgttcagtcagtttcgcaaagtctgctacgaacgcctg
catcgctcgatgccggcactggtcaaggcacccggcaagcaggccgcgctggatatcgcc
agcgatgcaattccggaggcggtaaaaggtttcgccacaccgagcgaatccctgcgcgcc
ctgtggccggccggcgagcaagaggcgcgacgccgcctcgataccttcaccgacgcgcag
atcgactactaccgcagtgaacgcgacttcccggccaaacctggcaccagccaattgtcg
gcgtatcttgccgccggcgtgatctcgccacgccagtgcctgcacgctgcactgcaaagc
aatcagggcgagttcgaaagcggcaaggtcggcgcagtgacctggatcaacgagctgctg
tggcgcgagttctataaacatattctggtcggctacccacgtgtctcccggcatcgcgcc
tttcgcccggaaaccgaagcgctggcctggcgcgatgcgccggaagaactcaaggcctgg
caagaggcacgcactgggctgccgatcatcgacgcggcgatgcgtcaactgctggaaacc
ggctggatgcacaatcgcctgcgcatggtcgtagcgatgttcctgaccaaaaacctgctg
atcgactggcgcgagggcgaacgctttttcatgcgccacctgatcgacggcgacctggcg
gccaacaacggtggctggcagtggagctcatcgaccggcaccgactcggcgccgtacttc
cgtatcttcaacccgttgagccagtcggaaaaattcgatgccgaaggcgtgttcatcaag
cactggttgccggaactggccgggctcaacaagaaggaagtgcacaatccggcggcagcc
ggaggactgttcggcgtggccgattatccggccccgatcgtcaacctcagcgcctcacgc
gagcgtgcgctgacggcgttcaagaacctgccgtcgcgccagcctgtgggcggcagcgat
gagtga
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