Pseudomonas siliginis: NF676_23330
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Entry
NF676_23330 CDS
T08569
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00260
Glycine, serine and threonine metabolism
psii00460
Cyanoamino acid metabolism
psii00630
Glyoxylate and dicarboxylate metabolism
psii00670
One carbon pool by folate
psii00680
Methane metabolism
psii01100
Metabolic pathways
psii01110
Biosynthesis of secondary metabolites
psii01120
Microbial metabolism in diverse environments
psii01200
Carbon metabolism
psii01230
Biosynthesis of amino acids
psii01240
Biosynthesis of cofactors
psii04981
Folate transport and metabolism
Module
psii_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NF676_23330
09102 Energy metabolism
00680 Methane metabolism
NF676_23330
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NF676_23330
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NF676_23330
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NF676_23330
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NF676_23330
Enzymes [BR:
psii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NF676_23330
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UST79049
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Position
5081454..5082707
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKAMAEV
FIARGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgacctttttgccgccatggag
caagaagctcagcgtcaggaagaacacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtcctgaccaacaagtacgccgaaggctatccg
ggcaagcgttactacggtggttgcgaatacgttgacgtggttgaacaactggccatcgac
cgtgccaaggaactgttcggtgctgattacgccaacgttcagccgcacgccggttcccaa
gccaacgccgctgtttacctggctctgctgcaaggtggcgacaccattctgggcatgagc
ctggcccatggcggtcacctgacccacggcgccagcgtttcctcctcgggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgt
ctggcggtcgagcacaagccgaaaatgatcgttgccggtttctcggcctactcgcagatc
ctcgacttcccgcgcttccgcgagatcgctgacaaggttggcgcctacctgttcgtcgac
atggctcacgtcgccggtctggttgccgctggtgtctacccgaacccggtaccgttcgcc
gacgtcgtgaccaccaccacgcacaagaccctgcgcggtccacgtggcggtctgatcctg
gccaaagcgaacgccgagatcgagaagaagctcaactccgcagtgttcccgggcgcccag
ggtggcccgctggagcacgtgatcgcggccaaggcgatctgcttcaaggaagcgctgcag
cctgagttcaaggcttaccagcaacaagtggtgaagaacgccaaggccatggccgaagtg
ttcatcgcgcgcggtttcgacgtggtttcgggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgctctgggcaaagcgttc
atcaccgtgaacaagaactccgtgcctaacgatccacgctcgccgttcgtgacttccggc
ctgcgcttcggtactccggctgtgaccactcgcggtttcaaagaggctgagtgcaaagag
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gttcgcgagaaagtcaaagccatctgcaagaaattgccggtgtacggcgcttaa
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