Pseudomonas siliginis: NF676_23680
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Entry
NF676_23680 CDS
T08569
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psii
Pseudomonas siliginis
Pathway
psii03030
DNA replication
psii03430
Mismatch repair
psii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NF676_23680 (holA)
03430 Mismatch repair
NF676_23680 (holA)
03440 Homologous recombination
NF676_23680 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psii03032
]
NF676_23680 (holA)
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_23680 (holA)
Enzymes [BR:
psii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NF676_23680 (holA)
DNA replication proteins [BR:
psii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NF676_23680 (holA)
DNA repair and recombination proteins [BR:
psii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NF676_23680 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
UST79118
LinkDB
All DBs
Position
5155574..5156611
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRTAARQQGFDERQVFAADANFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGQQTQFVQIWPVDANQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAVLNGEPAHALRMLEGLRGE
GVEPPVILWALARELRLLANISLQYSQGTPLDKCFSQSKPPVWDKRKPLMSKALQRYSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLALLMAGQRLSLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctcccgcgcaactcggcaaacacctgcaaggcgcacttgcgccggtctac
atcatcagcggcgatgatccgttgctgtgtcaggaagccgccgacgccatccgcaccgct
gctcgccagcaaggtttcgacgaacgtcaggtcttcgccgccgacgccaatttcgattgg
ggtacgttgctgcaggccggcgcaagcatgtcgctgttcgccgaaaaacgcctgttggaa
ctgcgcctgccgtccggtaagcctggcgataaaggcgccgccgcgctgatcgaatactgc
tcgcgtcctgcggaagacacggttctgctgatcagcttgccgaagctcgatggcagcgcg
cagaaaaccaagtggggcaaggcgctggtcgaaggccaacagacccagtttgtgcagatc
tggccggtggatgccaatcaactgccgagctggattcgtcagcgcctgtcccaggcaggt
ctgtcggccagtcaggacgccgtcgaattgattgccgcgcgtgtcgaaggcaacctgctc
gccgccgcacaggaaatcgaaaagctcaagttgatggccgaaggtgggcagatcaccgtc
gaaaccgtgcaggccgccgtggccgacagtgcccggtttgacgtgttcggcctgaccgac
gcggtactcaacggcgaaccggcgcacgcgttgcgcatgcttgaaggcctgcgcggtgaa
ggcgtcgaaccgccggtgatcctctgggcattggcgcgggagttgcgcctgctggccaac
atctccctgcaatacagccagggcacgccactggacaaatgcttcagccagtcgaaaccg
ccggtctgggacaagcgcaagccgctgatgagcaaggcgctgcaacgttactcggcgcaa
cgctgggcacagttgctgctcgaagcgcagcgcatcgatgcgcagatcaagggccaggcg
gcgggttcaccgtggatgagcctgagtcggttggcgctgttgatggctggccagcgattg
tctttgcctgccgaataa
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