Pseudomonas siliginis: NF676_23925
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Entry
NF676_23925 CDS
T08569
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_23925
Transporters [BR:
psii02000
]
Other transporters
Pores ion channels [TC:
1
]
NF676_23925
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
UST79164
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Position
5212922..5214805
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AA seq
627 aa
AA seq
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MNLSRLALPLLLLPTASALADTFERDQALKLPDTLISANRQVEARNDSSAANTVFTREDI
DRLQPSDVPDLLRRVPGVQVAQTGGRGSLPGIYIRGTQSAQSLVLVDGQRIGNSTSGDSN
LQHLNIEQIERVEVLRGSRSVIYGSDAIGGVIQIFTRRGTGQGLQPRLHLGFGSQQTWER
SLGLSGGDEKTRFNLGASLDETAGIDRTHDSYPSDSDHDAYRNKSLSLSLSHALNEDIEI
GANLLDNRGRSEFDNPFGRFDMDTFESVQQQPYSDFNISSVSSYVDAPVNETWKTRVEFG
HSENREKTFDKLSDERTVFNTYRDSVNWQNDLTLDPRNSLILGGDWYEDRINSSTAFDED
SRWNRAAFIQHHYQADSFSTEIGLRHDDNQQFGRQNTWSGTFTLPLNPDNDVLLSYSEGF
RAPTFNDLYYPDFSNPDLKPETSKSYELQWRSQLSDSARLEASIYRTDLQDAIIFGSNSR
PQNVASARINGFEAALKQELFGWQSNLGVAIIDPRDRDTGHTLARRARRTASWDLDRQFD
RLGLGASWQLVSGSYDDLNNTQSLGGYGTLGLRSSWALTREIKLDLKVDNLLDKGYSRAN
YSYDGAQYGYREEGRAWMFGVTWTPEL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctcgcgcctcgccctgcccctcctcctgctgccaaccgccagcgcccttgcc
gatacattcgagcgcgatcaggcgctgaagctgccggacacgttgatcagcgccaatcgt
caggtcgaggcgcgcaacgacagcagcgccgccaacaccgtgttcacccgcgaagacatt
gatcgcctgcaaccaagcgacgtgcccgatctgctgcgtcgcgtgcccggcgtgcaagtg
gcgcagactggcgggcgcggcagtctgccggggatctacattcgcggcacgcaatcggcg
cagagcctggtgctggtcgatggccagcgcatcggcaattcgacttccggcgacagcaat
ctgcaacatctgaacatcgagcagatcgagcgcgtcgaagtgctgcgtggttcacgctcg
gtgatttacggcagcgacgcgattggcggggtaatccagatcttcacccgacgcggcact
gggcaaggcttgcagccacgcctgcatctgggcttcggcagtcagcagacatgggagcgc
agcctcggcttgtccggcggcgacgagaagacccgcttcaacctcggcgccagcctcgac
gaaacggccgggatcgaccgtactcacgattcgtatccaagcgacagcgaccatgacgcc
taccgcaacaaatccctcagcctgagcctcagccacgcgctgaacgaggacatcgaaatc
ggcgccaatctgctggataaccgtggcaggagcgaattcgacaatccgttcggccgcttc
gacatggacacgtttgagtcggtgcaacagcagccgtacagcgacttcaatatcagtagc
gtgagcagttacgtcgatgcgccggtcaacgaaacctggaaaacccgcgtcgaattcggc
cacagcgaaaaccgcgaaaagaccttcgacaagctcagtgacgagcgcacggtgttcaac
acctatcgcgactcagtgaactggcagaacgacctgacgctcgacccgcgcaacagcctg
atcctcggtggtgactggtacgaagaccggatcaacagcagcactgcgttcgacgaggac
agccgctggaatcgcgcagcctttatccagcatcattatcaggccgacagcttctccacc
gagatcggcctgcgccacgacgacaaccaacagttcggccgccagaacacttggagcggc
actttcaccctgccgctcaatccggataacgacgtgctgctgagctacagcgaaggtttc
cgcgcgccgaccttcaacgacctgtactacccggatttcagcaatcccgacctgaaaccg
gaaacctcaaaaagctacgaactgcaatggcgcagccaattgagcgacagcgcgcggctc
gaggcctcgatttaccgcaccgatctgcaagacgcgatcatcttcggtagcaactcacgc
ccgcagaacgttgcgtcagcgcgcatcaacggttttgaagcagcgctgaagcaggagctg
tttggctggcagagcaatctcggcgtggcgatcattgatccgcgagatcgcgataccggg
catacgctggcgcgacgggcgcggcgcacggccagttgggatctggatcggcagttcgat
cgcttgggtctcggcgccagttggcaattggtcagtggcagttacgacgacttgaacaac
acccagtcgctgggcggctacggcacgctcgggctgcgcagcagttgggcgcttactcgt
gagatcaagctggatctgaaggtggataacctgctggacaagggttacagccgggcgaac
tacagctatgacggcgcgcagtatggctatcgcgaagaaggtcgggcgtggatgttcggg
gtgacctggacccctgaactctga
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