KEGG   Pseudomonas siliginis: NF676_24865
Entry
NF676_24865       CDS       T08569                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psii  Pseudomonas siliginis
Pathway
psii03030  DNA replication
psii03430  Mismatch repair
psii03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NF676_24865
   03430 Mismatch repair
    NF676_24865
   03440 Homologous recombination
    NF676_24865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psii03032]
    NF676_24865
   03400 DNA repair and recombination proteins [BR:psii03400]
    NF676_24865
Enzymes [BR:psii01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NF676_24865
DNA replication proteins [BR:psii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NF676_24865
DNA repair and recombination proteins [BR:psii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NF676_24865
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: UST79338
LinkDB
Position
5402493..5403200
AA seq 235 aa
MSLFSWLRPSSLVVSADLQQRLANLPALAELSECSLREQRWVVLDLETTGLNMSKDRVLS
IGAVVIEDGAIDFRQQFERTLQCRELKLSPSVLIHGLGPNAIAAGSDPAEALLELLEFIG
DSPVLAFHAPFDQHMLGRAVKEHLGHKLQHVFLDVADIAPFLCPQAQIREAGLDEWIEWF
RLEVFERHNASADALATAELALILFSRARAQQIYSPLQLQQRLSQWKRRQQAPSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttttcctggctgcgcccgtcaagtctcgtagtgtcggcggatctacagcag
cggctggcgaatctgccggcgcttgccgagctgagcgaatgcagcctgcgtgagcagcgc
tgggtggtgctggacctggaaaccaccggcctgaatatgagcaaggatcgggtcctgtcg
atcggcgcggtggtgatcgaggacggcgcgatcgatttccgtcagcagttcgagcgcacg
ctgcaatgtcgcgaattgaagctcagccccagcgtgctgattcatggcttgggaccgaat
gcgattgccgcaggcagcgacccggcggaagcgttgctggagttgctggagttcatcggc
gacagcccggtgctggcgtttcatgcgccgttcgatcagcacatgctcgggcgcgcagtg
aaagaacacctggggcataagctgcagcatgtgtttctggatgtggcagatatcgcgccg
tttctgtgtccgcaggcgcagattcgcgaggccgggctggatgagtggatcgagtggttt
cgccttgaagtgttcgagcggcataacgcgagtgccgatgcgctggccacggcggagttg
gcgttgatcctgttcagccgcgcgcgggcgcagcagatttacagtccgttgcagctgcag
cagcggttgagtcagtggaagcgcaggcagcaggcgccgtccttttag

DBGET integrated database retrieval system