Pseudomonas siliginis: NF676_25045
Help
Entry
NF676_25045 CDS
T08569
Name
(GenBank) GlxA family transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psii03000
]
NF676_25045
Transcription factors [BR:
psii03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NF676_25045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UST79373
LinkDB
All DBs
Position
complement(5443339..5444283)
Genome browser
AA seq
314 aa
AA seq
DB search
MSQDFYFLLMPGFSAIGFISAIEPLRVANRFRGELYRWHVLSADGGAVLASNGMSVNADA
ALEPLKKGATLLVVAGFEPLKFITPTLEHWLRRLDNDGVTLGAIDTGSFVLAEAGLLDGH
RLTLHWEAIDAFKESYPQLSVTQELFEIDRRRITSAGGTASIDLMLDLIAQAHGPQLAIQ
VSEQFVLGRIRPRKDHQRMEVATRYGISNKKLVQVIGEMEQHSEPPLTTLQLAESIKVTR
RQLERLFRLHLNDTPSNFYLRLRLEKARQLLRQTDMSVLEVSIACGFESPSYFTRSYRAR
FARCPREDRRTAQA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggatttctactttttgctgatgccggggttctccgccatcggctttatttcc
gcgatcgaaccgttgcgcgtggccaaccgttttcgcggcgagttgtatcgctggcatgtg
ctcagcgccgatggcggcgcggtattggcgagcaacggcatgtcggtcaacgccgatgca
gcgctggagccgctgaagaaaggcgcgaccttgctggtggtggccggcttcgaaccgctg
aagttcatcacgccgacgctggagcactggttgcgcaggctggacaacgacggcgtaacc
ctcggtgcgatcgacaccggcagcttcgtccttgccgaagcaggcctgctcgacggccat
cgcctgaccctgcactgggaggcgatcgatgccttcaaggaatcttatccacagctcagc
gtcacccaggagctgttcgagatcgatcggcggcggatcacctcggcgggaggtacggcc
tcgattgatctgatgctcgacctgatcgcccaggcccacggcccgcaactggcgattcag
gtcagcgagcagtttgtgctcgggcgcatacgcccgcgcaaggatcaccagcgcatggaa
gtcgccacgcgctacgggatcagcaacaagaaactggtgcaggtgatcggcgagatggaa
cagcacagcgaaccaccgctgaccacgctgcaactggcggagtcgatcaaggtgacccgg
cggcaactggagcgcttgttccggctgcacctgaacgatacgccgagcaatttctatctg
cggttaaggctggaaaaggcccggcagttgctgcgccagaccgacatgagcgtgctcgaa
gtgagcattgcctgcgggtttgaatcgccgtcgtatttcacccgcagttatcgcgcgcgt
ttcgcccgctgcccccgggaagaccggcgtaccgcgcaggcgtga
DBGET
integrated database retrieval system
