Pseudomonas siliginis: NF676_25405
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Entry
NF676_25405 CDS
T08569
Name
(GenBank) Hpt domain-containing protein
KO
K06596
chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Organism
psii
Pseudomonas siliginis
Pathway
psii02020
Two-component system
psii02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF676_25405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NF676_25405
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psii01001
]
NF676_25405
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psii02022
]
NF676_25405
02035 Bacterial motility proteins [BR:
psii02035
]
NF676_25405
Protein kinases [BR:
psii01001
]
Histidine kinases
CheA family [OT]
NF676_25405
Two-component system [BR:
psii02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
NF676_25405
Bacterial motility proteins [BR:
psii02035
]
Pilus system
Twitching motility proteins
NF676_25405
Chemosensory pili system proteins
NF676_25405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hpt
Response_reg
CheW
HATPase_c
H-kinase_dim
CSTF1_dimer
EarP
GH3_N_vert
Motif
Other DBs
NCBI-ProteinID:
UST79441
LinkDB
All DBs
Position
complement(5522954..5528863)
Genome browser
AA seq
1969 aa
AA seq
DB search
MGDRHDYVALEWVKGEIAETLKLAHQAIEAVLDDPQAFPGLDECLAYIHQVHGSLQMVEF
YGAALLAEEMEHLVEALQHDRVPHRDEALHLLLQALGQLPLYLDRVQSARRDLPLVVLPL
INDLRSARGESLLAETSLFSPPLPELAPLGDEALAALEPPDLPNVLRKLRQMLQMALVGL
LREQDDQTHLGYLAKVFSRLEALSGDAPLSPLWQIASALVEGMREGVIANSPALRSLFKD
ADQELKRLLEQGIVGLNQPAPAELLKSLLFYIAKAEHPTGQMLTMKDHYSLDDALPDSAM
VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASDLDSLLAPLRQIAD
TLAVLGFGQPRKVIIDQLAVVLSLAQGQREPNDAILMDVAGALLYVEATLAGMVGTVETQ
SAEDARLPTTDLTQIHQIVIKEARICLQQAKDMIVDYIDADWDRQHLQPLPELLTQVRGA
LAMIPLARAASLVEACNGFIREHLMLDAHEPGWEQLDHLADVISSLEYYLERLSDDPQAP
AEHLLDVAQNSLASLGFFANEQPGEAQVPVLDEVLSPSEAQLMQDLQTLDDPDVVQSLAE
VLASPVSALNPPARNTPDSLMPPPTDEEPVDDELREVFLEETDEVLAVLHEYLPRWSANP
QDRAALIELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLEQSVEPGAVLRQLLGDT
LLLLPELINEFATQRQRQRNDVDQLAARAHALAKGDEPLAAEDTDDVAALDPLLLEIFRK
EAETHLASLNRFLDQAAEQVPLPASDELQRALHTLKGSASMAGVLPMAELAASLDQLARE
FKAHQLPLDLDEVELLLEAEGLFRVGLRQLKHDPLAPIVGAQSLIKRTEALLAERLQASS
DGADSGLRLKRDPQLINNFLAQGMDILLDAENLLQRWQQHPGERQELSALLDELTTLGEG
AHLADLLAVDGLCEALLDLYGAVEESSLAVSERFFHEAQLAHEALINMLDELAAGQEITA
QPERIRALQELLDEGLDPAAMGLIRSDGSRTLDIRELGSATAQLQQSVAALEPDDEIVEI
FLEEAVDILDSAGQALQRWRKDPDNAAPLSSLQRDLHTLKGGARMAEVEVIGDLAQELEN
LYEGLVDRRYNHSTALEGLLQHSHERLALMLEQLQAHQALTPAQDLIDAIRQLRQGQAAS
ESAHAAVEHDNAGHDPELLEIFLEEGFDIIESSGAALLRWQAEPGNRQEIETLLRDLHTL
KGGARMVEIGPIGDLAHELEFLYESLSSGVLQPSAELFALVQRGHDRLAQMLDGVRAGQP
CPPADRLINAIQNFSHPVQVEAPPAPAPVIKPEAAPPSADAGADMVKVSSELLDELVNLA
GETSIFRGRIEQQVNDAQIALNEMETTIERMRDQLRRLDTETQGRILSRQQVDGERLGYE
DFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRNHDAENLLQQQGRINTELQEGLM
RTRMVPFERMVPRLKRIVRQVAEELGKDVAFVVGNADGEMDRNVLERMAAPLEHMLRNAV
DHGLEPADVRLAAGKPAQGQITLDLSREGGDMVFDIRDDGAGVPLEAVRRKAIKRGLLAP
DAEISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMSIDSVPGQGVHF
RIRLPFTVSVNRALMVQCGEDQYAIPLNTIEGIVRVLPNDLEGHFRHDPPSYQYGGQRYE
LCYLGELLKTAPRPKLLGQNLPLPVLLVHCNDRHIAVLVDAMAGTREIVVKSLGPQFAAV
QGVSGATILGDGRVVLILDLLAPIRAMQARLAQEPARTEIDSEPHKPLLIMVVDDSVTVR
KVTSRLLERHGMNVLTAKDGVDAMLLLEEHTPDLMLLDIEMPRMDGFEVATQVRADERLC
HLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIAQWSKKHA
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcggcacgactacgtggccctggaatgggtcaagggcgaaattgccgaaacg
ctgaagctggcgcatcaggcgatcgaggccgtgctcgacgatccgcaggccttccccggg
ctggacgaatgtctggcgtacattcatcaggtccacggcagtctgcaaatggtcgagttc
tacggcgcagcgttactggccgaagaaatggagcacttggtcgaagccctgcaacatgat
cgtgtaccgcaccgcgacgaagccctgcacctgctgctgcaagctctggggcaactgccg
ctttaccttgaccgcgtgcagagcgcccgccgcgacctgccgctggtggtgttgccgctg
atcaacgatctgcgcagcgctcgcggtgaaagcctgctggcggaaaccagcctgttcagc
ccgccactgcccgagctggcgccgctcggcgacgaggcactcgccgcgctggaaccgccc
gatctgccgaacgtgctgcgcaaactgcggcagatgctgcaaatggctctggtcggtctg
ctgcgcgaacaggacgaccagacgcaccttggctatctggccaaagtcttcagccgtctc
gaagcgctgagcggcgacgcgccgttgagccctttgtggcaaatcgcctcggcattggtc
gagggcatgcgcgagggcgtcatcgccaacagtccggcgctgcgcagcctgttcaaggac
gccgaccaagagctcaagcgcctgctcgagcagggcatcgtcgggctcaatcagccggcg
ccggccgagctgctgaaaagcctgttgttctatattgccaaagccgaacatcccaccggg
cagatgctgaccatgaaagatcactactccctggacgacgcgttgcccgacagcgcgatg
gtcgatgaagaacgcgcacgcctcgccggccccgaccgcgatgccatgcgctcggtgctg
gcggcgctgtgcgaagagctggtgcgggtcaaggagcgcctcgatctgttcgtgcgcagc
gaccgccagcacgcctcggatctggacagcctgctcgcgccgctgcggcagattgccgac
accctcgcggtgcttggtttcggccagccgcgcaaagtcatcatcgaccaactggcagtg
gtgctcagcctcgcccaaggccagcgcgaaccgaacgacgcgatcctcatggacgtcgcc
ggggccttgctctacgtcgaagcgacgctggccggcatggtcggcacggtggagacgcaa
agcgccgaagacgcgcgcctgccgaccaccgacctgacgcagatccatcagatcgtgatc
aaggaagcgcgcatctgcctgcaacaggccaaggacatgatcgtcgactacatcgacgcc
gattgggaccgccagcatctgcaaccgctgcccgaactgctgacgcaggtgcgcggagcg
ctggcgatgattccgctggcccgcgcggcgagtctggtcgaggcctgcaacggtttcatt
cgcgagcatttgatgctcgatgcccacgaaccgggctgggaacaactcgatcatctggcc
gatgtgatcagcagcctcgagtattacctcgaacgcctgagcgacgacccgcaggcgccc
gccgagcatctgctcgatgtcgcgcaaaacagccttgccagcctcggcttctttgccaac
gagcagcccggcgaagcgcaagtgccggtgctcgatgaggtgctcagccccagcgaagcg
cagctcatgcaggatctgcaaacccttgacgaccctgacgtcgtgcagtcgctcgccgag
gtgctggccagcccggtgtcggcgctcaacccgccggcgcgcaacacccctgacagcctg
atgccgccgccgaccgatgaagaaccggtcgacgatgaactgcgcgaagtattcctcgaa
gagaccgacgaagtcctcgcggtcctccacgaatacctgccgcgctggagcgccaatccc
caggaccgcgccgccctgattgagctgcgtcgggccttccataccttgaagggcagcggg
cgcatggtccgtgccttggtccttggcgaactggcctgggcggtggaaaacctgctcaac
cgcgtgctcgaacaaagcgtcgagcccggcgcagtgctgcgccaattgctcggcgacacg
ctgttgctgctgcccgagctgatcaacgaattcgccacccagcgtcagcgccagcgcaac
gatgtcgaccaactcgccgcccgcgcccacgcgttggccaaaggcgatgagccgctggca
gccgaagataccgatgatgtcgccgcgcttgatccgctgctgctggagatcttccgcaag
gaagctgaaacccacctcgccagcctcaaccgtttcctcgatcaggccgccgaacaggtg
ccgttaccggccagcgacgagctgcaacgggcgctgcacacgctcaagggcagtgcctcg
atggccggcgtattgccgatggccgaactggcggcttcactggatcaactggcccgcgag
ttcaaggcgcatcagttgccgctggatctggacgaggtcgaattgctgctcgaagccgag
ggcttgttccgcgtcggcctgcgtcagctcaaacacgatccgctggcgccgattgtcggt
gcgcagtcgctgatcaaacgcaccgaggcgctgctcgccgagcgcctgcaagccagctcc
gatggcgctgacagcggcctgcgcctcaagcgcgatccgcaactgatcaacaacttcctc
gcccagggcatggacatcctcctcgacgccgaaaacctcttgcagcgctggcagcaacac
cccggcgagcgccaggaactcagcgccctgctcgatgaactgaccaccctcggcgaaggc
gcgcaccttgccgatctgctggcggtcgatggcctctgcgaagccttgctcgacctgtat
ggcgcggtggaagaaagcagcctggcggtcagcgagcggtttttccacgaagcgcaactg
gcccacgaagcgctgatcaacatgctcgacgagctcgctgccggccaggaaatcaccgcg
caaccggagcggattcgtgccttgcaggaactgctcgacgaaggcctcgacccggcggcg
atgggcctgatccgcagcgacggcagtcgcaccctggatattcgcgaactgggcagcgcc
accgcgcaattgcagcaatcggttgccgccctcgagcctgacgacgagatcgtcgaaatc
ttcctcgaagaggcggtggacattctcgacagcgccgggcaagccttgcagcgctggcgc
aaggatccggacaacgccgcgccgctgtcgtcattgcagcgcgacttgcacacgctgaag
ggcggcgcgcgcatggccgaggtcgaggtcatcggcgacctcgcccaggaactggaaaac
ctctacgaagggctggtcgatcgacgctacaaccacagcaccgcgctcgaaggtctgttg
cagcacagtcatgagcgtttggcgctgatgctggagcaactgcaagcgcatcaagcgctg
accccggcgcaagatctgatcgacgcgatccgtcagttgcgtcagggccaggccgccagc
gaatctgcccacgcagcggtcgaacatgacaacgccgggcatgatccagagttgctggag
atcttcctcgaagaaggtttcgacatcatcgaaagctccggcgccgcgctgttgcgctgg
caggccgagccgggcaaccgtcaggagattgaaaccctgctgcgcgatctgcacaccctc
aagggtggtgcgcggatggtcgaaatcggcccgatcggcgacctcgcccatgagctggaa
tttctctacgaaagtctctctagcggtgtgctgcaaccgtccgccgaactgttcgcgctg
gtgcagcgcggccatgaccgactggcgcaaatgctcgatggtgtgcgcgccgggcagccg
tgcccaccggccgatcggctgatcaatgcgatccagaatttcagtcacccggtgcaggtt
gaagcgccgccagcgccggctccagtcatcaagcccgaggccgcgccgccgagcgccgat
gctggcgcggacatggtcaaggtctcgtccgaactgctcgatgagctggtcaatctggcc
ggggaaacctcgatctttcgtggacggatcgagcagcaggtcaacgatgcgcagattgcc
ctcaacgagatggaaaccaccatcgagcgtatgcgcgatcagttgcgccgcctcgacacc
gaaacccaggggcgcattctcagccgccagcaagtcgatggcgaacgcctcggttatgaa
gacttcgatccgctggaaatggatcgccattcgcagttgcagcaattgtcgcgggcgctg
ttcgaatccgcctcggacctgctcgacctcaaggaaaccctcgaccgccgcaatcacgat
gcggagaacctgttgcagcaacaggggcggatcaacaccgaattgcaggaaggcctgatg
cgcacgcgcatggtgccgttcgaacgcatggtgccgcgtctgaaacgcatcgttcgtcag
gtcgccgaagagctgggcaaggatgtcgcttttgtcgtcggcaatgccgatggcgagatg
gatcgcaatgtgctggaacgcatggccgcgccgctggaacacatgctgcgcaacgccgtc
gaccatggcctcgaacccgccgatgtgcggctggcggcaggcaaaccggcgcaagggcag
atcacccttgatctgtcccgcgaaggcggtgacatggttttcgacatccgcgacgacggc
gccggggtgccgctggaagccgtgcggcgcaaggcgatcaaacgcggcttgctggcgccc
gacgccgagatcagcgaccgcgacgtgttgcagttcatcctccagccgggtttctccacg
gcggaaaagatcacccagatttccgggcgtggcgtcggcatggacgtagtccacgaagag
gtgcgtcagctcggcggcagcatgagtatcgattcggtgccggggcagggcgtgcatttc
cgcattcgcctgccgttcaccgtgtcggtcaaccgcgcgctgatggtgcagtgcggcgag
gatcagtacgcgattccgctgaacaccatcgaaggcatcgtgcgtgtgttgccgaatgat
ctggaagggcatttccgtcacgatccaccgagttatcaatacggcggccagcggtatgag
ctgtgctatctcggcgagctgttgaagactgcgccacggccaaaactgctcgggcagaac
ctgccgttgccggtgctgctggtgcattgcaacgaccgccacattgccgtgctggtcgac
gccatggccggcactcgcgagatcgtggtcaagagcctcggcccgcagttcgcggcggtg
cagggcgtgtcgggggcgacgattctcggcgatggccgggtggtgctgattctggatctg
ctcgcaccgatccgcgcgatgcaggcgcgcctggcgcaagagccggcgcgcacggagatc
gacagcgaaccgcacaagccgttgctgatcatggtcgtcgatgactcggtgacggtgcgc
aaggtcaccagccgtttgctcgagcgccacggcatgaacgtgctgaccgccaaggacggc
gtcgatgcgatgctgctcctcgaagaacacacgcccgacctgatgctgctcgacatcgaa
atgccgcgcatggacggcttcgaagtcgccacccaggtacgcgccgacgaacgcctgtgc
cacttgccgatcatcatgatcacctcgcgcaccgggcagaaacaccgcgaccgcgccatg
gccatcggcgtcaacgactacctcggcaagccgtatcaggaatcggtgttgctggagagc
atcgcccagtggagcaagaaacatgcatga
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integrated database retrieval system
