Pseudomonas siliginis: NF676_25555
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Entry
NF676_25555 CDS
T08569
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
psii
Pseudomonas siliginis
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psii03021
]
NF676_25555 (rpoH)
Transcription machinery [BR:
psii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF676_25555 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
UST79471
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All DBs
Position
complement(5552228..5553082)
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AA seq
284 aa
AA seq
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MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNTNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcaacctgcgtatgcgctggttccgggtgcgaacctggaagcctat
gtgcacaccgtcaacagcattccattgctgacgccggagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacacattgcccgtagctattccggctacggtctggctcaggctgacctgatc
caggaaggtaacgtcggcctgatgaaggccgtcaagcgcttcaacccggaaatgggcgtg
cgtctggtgtcgttcgccgtgcactggatcaaggcggaaattcacgagttcatcctgcgc
aactggcgcattgtgaaagtcgcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaagcgcctggcgtggctgaataacgaggaagtccaccgtgtggcggaa
agccttggcgtcgaaccacgtgaagtgcgcgagatggaaagtcgtctgaccggtcacgac
atggccttcgacccggctgccgaagccgacgacgacagtgctttccagtctccggccaac
tacctggaagaccaccggtacgacccggcgcgtcaactggaagatgccgactggagcgac
aactccaacaccaacctgcacgaagcactggaagtgctggacgagcgcagccgtgacatc
ctctaccagcgctggctggcggaagagaaagccacgctgcacgatctggcgcagaagtac
aacgtgtcggccgagcgaatccgtcagctcgaaaagagcgcgatgaacaagctcaagttg
tcgatcgccgcttaa
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