KEGG   Pseudomonas siliginis: NF676_26710
Entry
NF676_26710       CDS       T08569                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
psii  Pseudomonas siliginis
Pathway
psii03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NF676_26710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psii03400]
    NF676_26710
Enzymes [BR:psii01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     NF676_26710
DNA repair and recombination proteins [BR:psii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     NF676_26710
SSDB
Motif
Pfam: Exo_endo_phos CbiK
Other DBs
NCBI-ProteinID: UST79685
LinkDB
Position
5796955..5797734
AA seq 259 aa
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLFPSGMNGDEDLN
QKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRSVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcggatcatcagtgtgaacgtcaatggtattcaggcggcagtcgagcgcggtttgctc
agttggctgcaagcccagaatgccgacgtcatctgcctgcaggacacccgtgcctccgcc
tttgaactggatgacccagccttccaactggatggctacttcctttatgcctgcgatgct
gaagtccctgcccaaggcggcgtggctttgtattcgcggttgcaaccgaaggctgtcatc
agcggtctcggtttcgagacggccgaccgctacgggcgctacctgcaagcagatttcgac
aaagtcagtattgccaccttgctgtttccttcggggatgaacggcgatgaggacttgaac
cagaagttcaagctcatggacgatttcggcaagtacctggacaaacagcgacgcaaacgt
cgcgagtacatttattgtggctcgctgtacgttgcgcagcagaaactcgacatcaagaac
tggcgcgacagccagcaatctccaggcttcctggcgccggaacgcgcctggatggacgag
attgtcggcaacatgggctacgtcgatgcgctgcgcgaagtcagccgcgaaggcgatcag
tacagctggtggccggataacgaacaggccgagatgctcaatctgggctggcgtttcgat
tatcagatcctgaccccgggcctgcgtcgctcggtgcgcagtgcacgcctgccgcgtcag
ccacggttctcgcagcacgcgccgttgatcgtcgactacgactggacgctgaccatctaa

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