Pseudomonas siliginis: NF676_26890
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Entry
NF676_26890 CDS
T08569
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
psii
Pseudomonas siliginis
Pathway
psii02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NF676_26890 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psii02044
]
NF676_26890 (tssK)
Secretion system [BR:
psii02044
]
Type VI secretion system
Imp/Vas secretion system core components
NF676_26890 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UST79719
LinkDB
All DBs
Position
complement(5839120..5840451)
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AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSGESKRPRLDSRYSHADQGASFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRQR
LPQHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccataaagtcatttggcaggaaggcatgctgctgcgaccgcagcacttccag
cacaacgatcgttattacgatcaccagatgaaaacccgcacgcaattgctcggtggctac
acctggggttttctcaatctggaaatcgacttgcagttcctcaacatgggcaaactggtg
atcagtgaagcctcggggattctgccggacggcagcctgttcgaacttggtggcaacact
gagccgctggcgctggacgtgccgccgaacaccggcaacacgccgatctatctggcgctg
ccgctggtcactggcaaccacatcgaggcccggcgcccggagcaatccgacgtgctcgcg
cgctacaccgcgtatgacgccgaagtcgccgactccaacgccggcgatgattccgccagc
caggtcagctgcggtcgcccggatttcaaactgttgctcggcgagcagcagagcgatcag
gcctacgtgaagctgaaaatctgcgacgtgctcgataccacgcccgacggcgtgatcagc
ctcgacccggacttcgtgccgacctacattcaggcccacgcctccagctatttgctgtcg
tgcctgaaagaagtcatcagcatgctcagccaccgtggcgacaccattgccgagcggatt
cgctccaacggcaaggtcggcggtgcggaagtcggtgacttcatgatgctgcaactgatc
aaccgcaccgaactgctgctgcgtcactatctgggtctggagcaggtgcatccggaagag
ttgtaccgcacgctgctgaccatgctcggcgatctggcgaccttctccggcgagagcaaa
cgcccgcgtctggacagccgctattcccacgccgatcagggcgcgagctttcgcaaactg
atggaagcgatccgccaagtgctgtcgatggtgctcgaacagcacgccatcgaactgatc
ctgcaggcgcgtcagtacggcatcatcgtctcgccgttgcacgatcacaaactgctcggc
tcggcctcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgtcagcgc
ttgccgcagcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcac
ttgccggggatcaaggtcaaaccgttgccggtggccccacggcagatcgcgttccactcg
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggtttcgcgttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
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