Pseudomonas siliginis: NF676_26955
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Entry
NF676_26955 CDS
T08569
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
psii
Pseudomonas siliginis
Pathway
psii02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NF676_26955 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psii02044
]
NF676_26955 (tssC)
Secretion system [BR:
psii02044
]
Type VI secretion system
Imp/Vas secretion system core components
NF676_26955 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
UST79731
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All DBs
Position
complement(5852267..5853742)
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AA seq
491 aa
AA seq
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MSTSAAQEKSAASGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccgccagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgtctgactccggacgacgaagcctacgacatcgccaagcgt
ggcgtgtcggcgttcatcgaagagctgctcaagccgcagaacaacggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gagatcctgcaccacccggatttccaggcgctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagccagtgggcgccatcatcgcc
aactactacatgtcgccaagctcgccagacgtcaagctgatgcagtacgtggccagcgtt
tcgtgcatgtcccacgcgccgttcatcgctgccgccggcccgaaattcttcggtctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacctcggaagactcgcgctacgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgatccggaagaaaacccggtgaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacaccgcttacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggttgaagatctgcctctgcaccatttcgaaagcatgggcgaaatc
gaaaccaagatccctaccgaggtattggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgcaaaggctccgacaacgcggcgttcttctccgcc
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggcggcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgtctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgacctcgagctg
gaactgaacaagtggatccgtcagtacgttgccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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