Pseudomonas siliginis: NF676_27230
Help
Entry
NF676_27230 CDS
T08569
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psii
Pseudomonas siliginis
Pathway
psii03420
Nucleotide excision repair
psii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF676_27230 (uvrD)
03430 Mismatch repair
NF676_27230 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psii03400
]
NF676_27230 (uvrD)
Enzymes [BR:
psii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF676_27230 (uvrD)
DNA repair and recombination proteins [BR:
psii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF676_27230 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NF676_27230 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Viral_helicase1
RHH_1
Motif
Other DBs
NCBI-ProteinID:
UST79785
LinkDB
All DBs
Position
5920125..5922308
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLVANKGLTGRAASALGAFIELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMSGSSLFNGSEIPETGFVLGQAVRHSIFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcagcccccgttggccgtcagttggtcctggccggcgccggttccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcacctcactccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccatcgcatcgagcagttgctg
ggcatcaacccggccggcatgtgggtcggcaccttccacggcctcgcgcaccgcttgctg
cgggcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgatgac
cagcagcgtctggtcaagcgggtgatccgcgagctgggcctggacgagcaacgctggccg
gcgcgtcaggcgcagtggttcatcaacggccagaaagacgaaggtctgcggccgcaacac
attcaggccagcggcgacctgttcctcgccaccatgcgcggcatctacgaagcctacgag
gcggcatgcctgcgggctggcgtgatcgatttctccgagctgctgctgcgcgccctcgat
ctgtggcgcgatcacccgggcctgctggcgcactaccaaaagcgcttccggcatattctg
gtcgacgaattccaggacaccaacgccgtgcagtacgcctggttgcgcctgctcggcaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatttacggctggcgcggg
gcgaagatcgagaacatccatcagtactcttcggacttcccggactccgagacgattcgc
ctggagcagaactaccgatccactgccggcatccttaaagccgccaacgctttgatcgcc
aacaacaccgggcgtctcggtaaagagctgtggaccgacggtggcgatggcgaagcgatc
aacctgtacgccgcgttcaacgagcatgacgaagcgcgctacgtggtagaaaccatcgaa
agcgcgctgaaaaccggtctggcccgtagcgatatcgccattctgtaccgctccaacgcc
cagtcgcgggtgctcgaagaagccctgctgcgcgagcgcatcccgtaccgcatctatggc
ggtcagcgcttcttcgaacgcgcggaaatcaagaacgccatggcctacctgcgcttgctc
gaaggtcgtggcaacgacgcggcgctggagcgagtgatcaacgtacccgcgcggggcatc
ggcgagaaaaccgtcgaagcgatccgcgagcatgcgcggcacagcgacgtatcgatgtgg
gaagcgatgcgccagctggtggccaacaaaggcctgaccggccgtgcagcgagcgcgctc
ggtgcatttatcgaactgatcgagaacctcgccgccaagtgcgccgagatgccgctgcac
ctgatgacgcaaaccgtcatcgagcaatccggcctgatcgcttatcacgaagcggaaaaa
ggcgaaaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgccgcacgtaac
ttcgagaacaccgaagaggacgaagaactgaccccactggcggcgttcctcggccacgct
tcgctggaggccggcgacactcaggccgacgagcacgaagacagcgtgcagctgatgacc
ctgcacagcgccaaaggcctggaattcccttacgtgttcctcgtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaaccggggcgtctcgaggaagaacggcgtctg
gcttacgtcggtatcacccgagccatgcagaatctggtcatgacctacgccgaaacccgg
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtccgcgaggtgccgaaa
ggcctgatccaggaagtgcgcctgtccaatagcgtcagccgaccgttcggcggcaaccag
tcgatgagcggcagcagcctgttcaacggcagcgagattccggaaaccggttttgtgctc
ggtcaggccgtacgtcactcgatcttcggcgaaggggtgatcctcaacttcgaaggttcc
ggcgcccaggcccgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctcggc
tatgccaagctggaagcgatctaa
DBGET
integrated database retrieval system
