Pseudomonas siliginis: NF676_27520
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Entry
NF676_27520 CDS
T08569
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psii
Pseudomonas siliginis
Pathway
psii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF676_27520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psii03021
]
NF676_27520
Transcription machinery [BR:
psii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF676_27520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_32
HTH_23
HTH_40
DUF2774
Annexin
PhyR_sigma-like
HTH_11
DUF4211
HTH_20
HTH_Tnp_4
HTH_24
DUF722
Motif
Other DBs
NCBI-ProteinID:
UST79842
LinkDB
All DBs
Position
5983578..5984084
Genome browser
AA seq
168 aa
AA seq
DB search
MPLPAHTAAIEQIYEQHHSWLYGWLKGKLHNACDAADVAHDTFLRVLAARNAAHIREPRD
YLTTIARGLVIDRYRRRAIESAYLQALAARPEASVISEEDRALIIETLIAVDKALTGLGP
RTRQIFMLSQVDGLTYQQIAVQLRVSLTTVKKHMIRALTECALLMAQP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgcccctacccgcccacaccgctgcgatcgagcaaatctacgagcaacatcattcgtgg
ctgtatggttggctcaagggcaaactgcacaacgcctgcgatgcagccgatgtggcgcat
gacacgtttttgcgagttctggcggcgcgcaatgcagctcatattcgtgagccgagggat
tacctgacgactattgcgcgcggcctggtcatcgatcgttatagacgcagggcgattgaa
agcgcttatctgcaggccctcgcagctcggccggaagcgtcagtcattagcgaagaagac
agggcgctgatcattgaaaccctgatcgctgtggataaagcattgaccgggctgggtccg
cgaacacggcagatcttcatgctttcgcaagtcgacggactgacttatcaacagatcgcc
gtgcaattgagagtctcgctgaccacagtaaaaaaacacatgatccgcgccctgactgag
tgcgccctgctcatggcgcagccatga
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