Pseudomonas silesiensis: PMA3_02020
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Entry
PMA3_02020 CDS
T05412
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psil
Pseudomonas silesiensis
Pathway
psil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PMA3_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psil03019
]
PMA3_02020
03009 Ribosome biogenesis [BR:
psil03009
]
PMA3_02020
Messenger RNA biogenesis [BR:
psil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PMA3_02020
Ribosome biogenesis [BR:
psil03009
]
Eukaryotic type
Pre-60S particles
RNases
PMA3_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANJ53990
UniProt:
A0A191YM78
LinkDB
All DBs
Position
459472..460014
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEILAGMDEW
NTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPSVRDSFQKGSTHLALDDIRESIAELQHYRKNFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaatctgatctggatcgacctggaaatgaccggtctgaaccctgat
accgacgtcatcatcgagatggcgacgatcgtcactgacagtgatttgaacaccttggcc
gaaggtccggtgatcgccatccatcacagcgatgagatcctcgccggcatggacgagtgg
aacacccgtcaacacggcggctcgggcctgacccaacgggttcgcgacagccgcatcagc
atggccgaagccgaagccgagaccatcgccttcctggaaaaatgggtgccgaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccgtcgctttctatatacccacatgaaa
tccctggaaagctatttccactaccgcaacctcgacgtgtcgaccctgaaagaactggcc
gcacgctgggcgcctagcgtgcgcgacagtttccagaaaggcagcacccacctggccctg
gacgacatccgtgaatccatcgccgagttgcagcattaccgcaagaatttcatcaagttc
tga
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