Pseudomonas silesiensis: PMA3_11385
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Entry
PMA3_11385 CDS
T05412
Name
(GenBank) type IV secretion protein Rhs
Organism
psil
Pseudomonas silesiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
AHH
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
ANJ55718
UniProt:
A0A191YSF6
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Position
2495147..2499373
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AA seq
1408 aa
AA seq
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MFEAARWGDEIEHTSALGGFLVGAVIGLAIATAAAFTICTAGLGGILLSIAAGVGASFIP
AIGESMGAARSSPAGGIKLEGCSADVFINNRNAAHATLSQGACDKHPAPVLVAEGSSNVF
INNVAAARKGDKLTCGAKISSGSNNVFIGGGTERYLDVDEEVPAWLRVTVDVLMIVASMG
RAVGPIFRLGLTQGLKAAGPCALKFGATIAGSYLAGRFIIGPAVERAIGGLSGNPVDLTT
GRKVLFESGETDFALPGLMPIEWSRFYASDLNVESVLGRGWVLPWEQSLRRSGSFVYLTD
NQGRSVPFVDVEPGDRTYNPYEQIHLVRTEGGHYLLQTLDNTFFYFGEVPDDDTAVQLQR
IENALGHYLHFSYSADNTLTDISAPGGVRVHLHYDNPLGRLTDVKRVVDNLAVETLVQYR
YDENGQLIEVINRNNDSVRRFSYADGVMASHSNALGLTCNYRWQTLGDQPRVVEHWTSDG
EHFHYRYDFNQRVSWATDVLGRELEIQYNEDRRVIASRDYGGECYGIALDEAGNMTGLNL
PDGNKLAFKYDDFSRLMEETDPLGRKIKYKYHLSTTLVTETTFMDGSTWKARYDAKGNLI
AEVDALGHKTEYLNSDDGLPHTIIDATHKSKYLWWNTLAQVERFQDCSGKSTHYRFDERH
HLIAVTDALNQTTTLERKPDGEVLRIQHPDGSAESFTYNALGQVLTHTDGKGQTTRLLRT
ARGLPSSRQDAKGQRIRYEYDQAIRLTALVNENNAAYQFAYDASDRLVEEKRIDNLTRQF
SYNLGGHLTRVDEIGYGERGERPQRHTEFERDPIGRLLAKLNADARQDYTYDDADRLLTI
ERLPTANGKKLGVSAEKLDFSYDLLGRLIKETTPQGELAYDYDPLSNLTTLTLPTGQHLN
HLYYGSGHLHQLNLDGQLISDMERDDLHREVLRTQGTLTSCFGYDAMGRKAWQFASTLPA
EKLSQILNPGIQPELLVEHAYNPIHRRHQYDPAGELTRTLDKLRGEIKYDYEANGQLRSR
DTGKLVDSEEFRYDAAANRLNFNTSQFDHVKNNRIKQWRDQEYAYDAWGNLIEKRSGLSR
LQTFSYDGENRLVKAETLVNGKLESSGAYRYDSLGRRVAKVSAVNGVTEQKHFLWQGLRL
LREETPGQSSLYLYEPGSYAPLARVDQVEGGEQQLYYFHTDQIGTPLEMTDREGRIVWQA
TYKAWGSVEKLEVNEVEQNLRFQGQYFDDETGLHYNTFRYYDPEVGRFITQDPIGLLGGG
NLYFYVPNSMGWIDPQGLSSADLRVELGMRPGDMHAAHHIIPEEVMKKYPQMFDKAKTFG
FMPDGASNGIELPRTKDLAKTLDLPGHWSNHVDYTALVESDVSKLNTAFRAGRLTDMDLA
LGLKSIQNKWRSNILAKNVPTNAKGRLC
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagcagctcgttggggtgatgaaattgagcacaccagtgctcttggcgggttc
ctcgttggtgcagtgattgggcttgcgatagcaactgctgccgcattcacgatttgtacg
gctggtttgggtggaatcctgctgagtattgcagcaggcgtgggtgccagcttcattccg
gcgattggggagagcatgggagcggcacgaagttctccagccggaggaataaagctggaa
gggtgctctgcggatgtgttcatcaacaaccgtaatgctgcccatgcaactctgagtcaa
ggcgcgtgtgataaacacccggcgccggtgctagttgcggaaggttcgtccaacgtattc
atcaacaacgtggcggctgcgcgcaagggtgacaaacttacctgtggtgcgaaaatatcc
agtggctcgaataacgtgttcattggtggcggaacagaacgctatctcgacgtagacgaa
gaggtaccggcctggctacgcgttaccgtcgatgtgttgatgatcgtcgcttccatgggg
cgcgcggtaggtccgatcttccggctcggactgacacaggggctgaaagctgccggtccg
tgcgcattgaagtttggggcaacaatcgcaggtagctatctggccggtcgtttcataatc
ggaccggccgtagagcgcgcgatcggcggcttaagcggcaatccggttgatcttacaacg
gggcgcaaagtgttgttcgagtcgggtgaaaccgactttgcgctccctgggctaatgccc
attgaatggtctcgtttctacgcaagtgatttgaacgttgaaagcgtgctgggtagaggg
tgggtgctgccgtgggaacaaagtctgcgcagaagtggcagcttcgtctacctcactgat
aaccaggggcgcagtgtgccttttgttgacgttgaacctggcgatcgcacctacaaccct
tatgagcaaatccacttggttcgcactgagggcggtcactacctcctacagacactcgac
aacactttcttctatttcggcgaagtgccggacgacgatactgctgttcagttgcagcgc
attgaaaatgccctggggcattacctgcacttcagctattcggccgacaatacgcttacc
gacatcagcgccccgggcggtgtccgtgttcacctgcattacgacaatcctctgggtcgc
ctgaccgacgtcaagcgtgtggtcgacaacctcgccgtcgaaaccctggtgcagtaccgt
tacgacgaaaatggtcaactgatcgaagtgatcaatcgcaacaacgattccgttcgacgt
ttcagctacgccgatggcgtcatggccagtcacagtaacgccctcggcctgacctgcaat
taccgctggcagaccctcggcgatcagcctcgcgtggtggagcactggaccagcgatggc
gaacattttcactaccgctacgacttcaaccagcgcgtttcctgggctactgacgtgctg
gggcgtgagttggaaattcagtacaacgaggaccgtcgcgtgattgccagtcgtgattac
ggcggcgaatgctacggtattgccctggacgaagccggcaacatgacgggtttgaatctg
cccgatggcaacaagctcgcgttcaaatacgacgacttttcacgcctgatggaagagacc
gatccactgggtcgcaaaatcaaatacaaatatcacctcagtaccacgctggtcactgag
acgactttcatggacggcagcacctggaaagcccgctacgacgccaagggcaacctcatc
gccgaagtcgacgcgctgggccacaaaaccgaatacctgaacagcgacgacggcttgccg
cacaccatcatcgacgccacgcacaagtccaaatacctgtggtggaacaccctggcccag
gtcgagcgcttccaggactgctcgggcaaaagcacccactaccgcttcgacgagcgccac
cacctgatcgccgtcaccgacgccctgaaccagaccaccaccctggaacgcaaacccgac
ggcgaagtgctgcgcatccagcacccggacggcagcgccgaatccttcacctacaacgcc
ctcggccaggtcctgacccacaccgacggcaaaggccagaccacgcgcctgctgcgcacc
gcccgcggcctgccgagcagccgccaggacgccaagggccagcgcatccgctatgaatac
gaccaggccatccgcctgaccgcgctggtcaacgaaaacaatgcggcctaccagttcgcc
tacgacgcgtccgaccggttggttgaagagaagcgcatcgacaacctgacccgccagttc
agctacaacctcggcgggcacctgacacgggtggatgaaatcggctacggcgagcgcggc
gaacgaccacaacggcataccgaattcgagcgtgacccaatcggccgactactggccaaa
ctcaatgccgatgcgcggcaggactacacctacgacgacgcagaccgtttgctcaccatc
gagcgcctgcccaccgccaacggcaaaaaactcggcgtcagcgcagagaagctcgatttc
tcctatgacctgctgggccgtctcatcaaggagaccacaccccaaggcgagctggcctac
gactacgacccactaagcaacctgaccacgctgactctgcctaccggccagcacctgaac
cacctgtactacggcagcggccacctgcaccagctcaacctcgacggccagttgatcagc
gacatggagcgcgacgacctgcaccgcgaagtgctgcgcactcaaggcacgctcaccagt
tgttttggctatgacgcgatgggccgcaaggcttggcaattcgcctcgactttgccggca
gaaaaactctcgcagattcttaacccgggcatccagcctgaactattggtagaacacgcc
tataacccgatccaccgccgtcaccaatacgatcccgccggcgaactgacccgcaccctc
gacaagctgcggggtgagatcaagtacgactatgaagccaatggtcaactgcgcagccgt
gacaccggcaagctggtggacagcgaagagttcaggtacgacgcagcggcgaaccggctg
aacttcaacaccagtcagtttgatcacgtgaagaacaaccggatcaagcagtggcgcgat
caggaatatgcctacgatgcgtggggtaacctgattgaaaagcgcagcgggttgagccgg
ctgcaaacgttcagttatgacggcgaaaatcggctggtcaaggccgagaccttggtgaat
ggcaagctggaaagcagcggtgcctatcgttatgacagcttgggacggcgggtggccaag
gtgtcagcggtcaacggcgtcaccgagcagaagcactttttgtggcaaggcctgcgcctt
ttgcgcgaggaaaccccggggcagagcagtctgtacctctacgagccgggcagttatgcg
ccgttggcgcgggtggatcaggttgagggtggggaacaacagctctattacttccatacc
gaccagattggtacgccgctggagatgacggaccgagaggggcggattgtctggcaggcg
acgtacaaggcgtggggctcggttgaaaagctcgaagtgaacgaggtcgagcagaacctg
cggtttcaggggcaatatttcgacgacgagacggggctgcactacaatacgtttcggtat
tatgatccggaggttgggcgatttattacgcaggatcctatcgggttattgggcggaggc
aatctttatttttacgttcccaactcgatgggctggattgaccctcagggattgtcgagt
gccgacttacgtgttgaattgggtatgcggcctggagatatgcacgcagctcatcacatt
attcccgaagaagtgatgaagaagtatccacaaatgttcgacaaagcgaaaacgttcgga
tttatgcctgatggagcgtccaacggtatcgagttacctcgaactaaagacttggctaaa
acccttgatctccctggccattggagcaatcacgtagactatactgctctagttgaaagc
gatgtgagtaagctcaataccgccttcagggcagggcgattaaccgatatggacctagcg
ttagggttgaaatctattcagaataaatggcgatcaaatattttagctaaaaacgtacca
actaacgctaaaggtcggctttgttaa
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