Pseudomonas silesiensis: PMA3_12110
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Entry
PMA3_12110 CDS
T05412
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
psil
Pseudomonas silesiensis
Pathway
psil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMA3_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psil03400
]
PMA3_12110
DNA repair and recombination proteins [BR:
psil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMA3_12110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PMA3_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
AAA_16
AAA_29
DnaJ_CXXCXGXG
AAA_25
RsgA_GTPase
MCR
Motif
Other DBs
NCBI-ProteinID:
ANJ55847
UniProt:
A0A191YSK8
LinkDB
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Position
2679283..2681919
Genome browser
AA seq
878 aa
AA seq
DB search
MTDKRTSNPPSGMVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQ
RRYFESVAPYARRLIDQVGVPDVDSIDGLPPAVALQQQRGTPSTRSSVGSVTTLSSLIRM
LYSRAGSYPPGQPMLYAEDFSPNTPQGACAECHGLGRVYEVTEALMVPDPSLTIRQRAVA
SWPMAWQGQNLRDILVTLGYDVDIPWRDLPKKQRDWILFTEETPTVPVYAGLTPAETKVA
LKRKMEPSYQGTFTGARRYILHTFTHSQSALMKKRVSRYMLGSPCPVCDGKRLKQEALSV
TFAGYDIGELSQMPLLQVAEVLKPVAAHSYLELADEAGEVLTHLQTREAREQRVAHGASG
HANAPDVRHTPNLSVEKRLAAQRIAQDLLERVSTLTDLGLGYLALERSTPTLSSGELQRL
RLATQLGSQLFGVIYVLDEPSAGLHPADGEALFESLQRLKAAGNTLFVVEHDLETMRRAD
WLIDVGPEAGEHGGRILYSGPPPGLADVTHSQTRAYLFAEQVAQPRVGRQATDWLRLEGI
TRNNLNNLGVEFPLGCFTAVTGVSGSGKSSLVSQALLELVGAHLGRAASDSEAEELSLED
DAPQVSGGQVTSGLASIKRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLYAATPQARDNG
YDAGQFSFNVAKGRCATCEGEGFVSVELLFMPSVYAPCPTCHGARYNPETLSITWQGLNI
AQVLQLTVDEAVEVFAGQPGIRRSLEVLRDIGLGYLRLGQPATELSGGEAQRIKLATELQ
RNQRGATLYVLDEPTTGLHPRDVDRLLEQLNTLVAAGHTVIVVEHEMRVVAQSDWVIDIG
PGAGDQGGKIVVAGTPQKVAKSRKSKTAPFLARTLGMA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaagcgcacctccaaccctccctccggcatggtcagggtgcgcggcgcccgg
gaacacaacctcaagaacgtcgatgtcgatattccccgggatgccctggtggtattcacc
ggggtctccggatcgggcaagtcttcgctggcgttctcgaccctctacgccgaagcgcaa
cgccgctatttcgaatccgtggcgccttatgcgcggcgcctgatcgatcaggtcggggtg
ccggacgtcgactcgatcgacggcttgccgcccgccgtggcgttgcagcaacagcggggc
acgccgagcacgcggtcgtcggtgggcagcgtgaccacgttgtcgagcctgatccgcatg
ctgtattcccgggccggcagctatccgccgggacagccgatgctgtacgccgaagacttc
tcgcccaacacgccgcagggggcgtgcgccgaatgtcatggactgggccgggtctatgaa
gtcaccgaagccttgatggtcccggacccgagcctgaccatccgccagcgcgccgtcgcc
tcctggcccatggcctggcaggggcagaacctgcgggacatcctggtgaccctgggctac
gacgtcgatataccctggcgcgatctgccgaaaaaacagcgcgactggattctgttcacc
gaagaaacaccgaccgtgccggtgtatgccgggctgactccggcagaaacgaaagttgcg
ctcaaacgcaaaatggaacccagttaccagggcacgtttaccggcgcccggcgctacatc
ctgcacacctttacccattcccagagtgcactgatgaagaagcgcgtttcacgctacatg
ctcggcagtccttgcccggtgtgtgacggcaaacggctcaagcaagaagcgttgtcggtg
accttcgccggttacgacatcggcgagctgtcgcagatgccgttgctgcaagtggctgaa
gtcttgaagccggtggcggctcacagttacctcgaactggccgatgaagcgggcgaggtg
ttgacgcatctgcagacccgcgaagcccgtgagcagcgagtggcccatggcgccagcggt
cacgccaacgcgccggacgtgcgccacacgcccaacctgtcggtggaaaaacgcctggcc
gcgcaacggatcgcccaggacttgctggagcgggtcagcaccttgaccgacctgggcctc
ggttacctcgccctggaacgcagcacgccgaccttgtcctccggcgagttgcagcgtctg
cgcctggcgacgcaattgggttcgcagttgttcggcgtgatctacgtgctggacgagccg
tcggccggtctgcacccggcggatggcgaggcactgttcgaatccctgcaacggcttaag
gccgccggcaataccttgttcgtggtcgagcatgacctggaaaccatgcgccgtgccgac
tggctgatcgacgttggcccggaagcgggcgagcatggcggccggatcctctacagcgga
ccgccgccagggttggccgacgtcactcactcccagactcgcgcctacctgttcgccgag
caggtcgcccagccccgggttggccgccaggcgaccgactggctgcggctggaaggcatc
acccgcaataacctgaacaacctcggcgtcgagtttccgctgggctgtttcacggcggtg
accggtgtatcggggtccggcaaatcgagcctggtcagtcaggcgctgctggaactggtg
ggcgcacatctggggcgcgccgccagtgacagcgaggctgaagagttgagcctggaggac
gatgcgccacaggtcagcggcggccaggtcaccagtggcctggcgtcgatcaagcgtctg
gtgcaggtcgatcagaaacccatcggccgcacaccccgttcgaacctggcgacctacacc
gggctgttcgacaacgtgcgcaagctctacgccgccacgccccaagcccgggacaacggc
tatgacgccggccagttttctttcaacgtggccaagggacggtgtgcgacctgcgaaggc
gaaggctttgtcagcgtcgaattgctgttcatgcccagcgtctacgccccgtgcccgacc
tgccacggtgcgcgctacaaccccgagaccctgtcgatcacttggcagggtttgaatatc
gcccaagtgttgcagttgacggtggacgaagcggtcgaggtgttcgccgggcagccgggg
atccgccgctcgctggaggtcctgcgcgatatcggcctgggctatctgcgtctcggccag
ccggcgaccgaattgtcgggtggcgaggcccagcggatcaaactggccaccgaactgcaa
cgcaaccagcgtggggcgaccttgtatgtactcgatgagccgactaccggcttgcatcca
cgggatgtcgatcgcttgctcgaacagttgaatacgctggtggcggcggggcatacggtg
atcgtcgtcgaacatgaaatgcgcgtggtggcgcagagcgactgggtgatcgatatcggc
ccgggggcgggggatcagggcgggaagatcgtggtggcggggacgccgcagaaagtggct
aaaagcaggaagagcaaaacggcaccgtttctggccaggacccttggtatggcttga
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