Pseudomonas silesiensis: PMA3_13335
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Entry
PMA3_13335 CDS
T05412
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
psil
Pseudomonas silesiensis
Pathway
psil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PMA3_13335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psil03400
]
PMA3_13335
DNA repair and recombination proteins [BR:
psil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PMA3_13335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ANJ56072
UniProt:
A0A191YT74
LinkDB
All DBs
Position
complement(2965604..2966476)
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AA seq
290 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMEPVGYKRVNKVTGKEVTKEH
IVKGVQYEKGRYVVLSEEEIKSAHPLSTQTIDIFSFVDSDQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALAHVVLHTRQHLAALMPLESAMVLVMLRWPAEVRSLETLELGS
DVTSAKLVKGELDMAKRLVEDMSAEWSPEDYRDSFEDKIMALVEKKAHEGKIEDVETATG
EEERKTADVIDLTELLKRSLGGKAAAKPAAKAKSSDKPAPAKKTSKRSSG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcaatcagtttcgggctggtgcatatccctgtcgcg
ctggtttcggcgacgtcttcccaaggggtggatttcgactggctcgacagccgcagcatg
gagccggtcggctacaagcgcgtgaataaggtcaccggcaaggaagtcaccaaagagcac
atcgtcaagggtgtgcagtacgaaaagggtcgctacgtggtactcagcgaagaggaaatc
aagtcggcgcacccgctgtccacgcaaaccatcgacatcttttcttttgtcgacagtgat
cagatccctttgcaaaacatcgacacaccttactaccttgcacctgataaacgcggcggc
aaggtatacgcgctgttgcgcgaaacactcagcaaaaccaacaaggtcgccctcgcccat
gtggtcttgcatactcgccagcacctggcagcgctgatgcctctggagtcggccatggtt
ctggtgatgctgcgctggccggccgaagtgcgcagcctggaaacgctcgaactgggcagc
gacgtcaccagtgcgaagctggtcaagggcgaactggacatggccaaacggttggtcgaa
gacatgagcgccgagtggagccctgaagactatcgcgacagtttcgaagacaagatcatg
gcgctcgtggagaaaaaggcccatgaagggaagatcgaggacgtggaaacggcgacgggt
gaagaggagcgcaaaactgcggatgtgattgatttgactgaactgcttaagcgtagtctg
gggggcaaggcggctgccaaacctgcagcgaaagcgaaatcgagcgacaagccggcgccg
gccaaaaaaacttcaaagcgttccagtggctga
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