Pseudomonas silesiensis: PMA3_21730
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Entry
PMA3_21730 CDS
T05412
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psil
Pseudomonas silesiensis
Pathway
psil02020
Two-component system
psil02025
Biofilm formation - Pseudomonas aeruginosa
psil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PMA3_21730
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PMA3_21730
09142 Cell motility
02040 Flagellar assembly
PMA3_21730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psil03000
]
PMA3_21730
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psil02035
]
PMA3_21730
Transcription factors [BR:
psil03000
]
Prokaryotic type
Helix-turn-helix
Other families
PMA3_21730
Bacterial motility proteins [BR:
psil02035
]
Flagellar system
Flagellar assembly proteins
Others
PMA3_21730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
bpMoxR
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ANJ57636
UniProt:
A0A191YY19
LinkDB
All DBs
Position
complement(4923299..4924774)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPGALLGLLKTLSTWDEFLPVLLMGDNSSVDLPEDLRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEIGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHAPD
FSASALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgttcgccgccgggatctg
gcggtgattttgaattttcttggtgaagaaaatttgccctgcggcagccatgactggcag
caggctgtcggctcgttgtcatcaagtcgtgaagtgatctgtgttctcatcgggacggtc
aatgcgcctggtgcacttttgggcttgttaaagacactctctacctgggatgagttcctt
ccggtgttgttaatgggcgataattcttccgttgacttgcccgaagacttgcgtcgtcgg
gtgctgtcgaccctggaaatgccgcccagctacagcaaattgctcgactcgttgcaccgt
gcccaggtctatcgcgagatgtatgaccaggcgcgcgagcgcggtcgacaccgcgaaccg
aatcttttccgcagtctggtcggcaccagccgggcgatccagcacgtgcggcagatgatg
cagcaggttgccgacaccgatgccagtgtgctgatcctcggggagtccggtactggcaag
gaagtggtcgcgcgcaacctgcactaccactccaagcggcgtgacgcgccgttcgtgccg
gtcaattgcggggcgattccggcggaattgctggaaagcgaactgttcgggcatgagaag
ggcgccttcaccggggcgatcaccagtcgggccgggcgcttcgagctggccaacggcggc
accctgttcctcgatgaaatcggcgacatgccgttgccgatgcaggtcaagctgttgcgc
gtattgcaggagcgcacgttcgagcgcgtgggcagcaacaagacccagagcgtcgatgtg
cgcatcatcgcggcgacccacaagaatctcgaaagcatgatcgagatcggctcgttccgt
gaagacttgtattaccgcctgaacgtattcccgattgaaatggcgccgctgcgcgagcgt
gtcgaagacatcccgctgctgatgaacgagttgatctcgcgcatggagcacgagaagcgc
ggttcgatccgtttcaattccgcggcgatcatgtcgctgtgccgtcacggctggccgggc
aacgtccgtgagctggccaacctggtggagcgcatggcgatcatgcatccctacggggtg
attggcgtggtcgagttgccgaagaagtttcgttatgtcgacgatgaagacgagcagctg
gtcgacagcctgcgcagtgatctcgaagagcgggtggccatcaacgggcatgccccggat
ttcagtgccagtgcgctgctgccgccggaaggcctggacttgaaggactacctgggtggt
ctggagcaggggctgattcagcaggcgctggatgatgccaatggcatcgtcgcgcgcgcc
gcggaacgcctgcgtattcgtcgcaccaccctggtggagaagatgcgcaagtacggcatg
agccggcgtgagggtgatgaacaggcggaggattga
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