Pseudomonas silesiensis: PMA3_22980
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Entry
PMA3_22980 CDS
T05412
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psil
Pseudomonas silesiensis
Pathway
psil00061
Fatty acid biosynthesis
psil00071
Fatty acid degradation
psil01100
Metabolic pathways
psil01212
Fatty acid metabolism
psil02024
Quorum sensing
psil04146
Peroxisome
Module
psil_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PMA3_22980
00071 Fatty acid degradation
PMA3_22980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PMA3_22980
09145 Cellular community - prokaryotes
02024 Quorum sensing
PMA3_22980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psil01004
]
PMA3_22980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psil04147
]
PMA3_22980
Enzymes [BR:
psil01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PMA3_22980
Lipid biosynthesis proteins [BR:
psil01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PMA3_22980
Exosome [BR:
psil04147
]
Exosomal proteins
Exosomal proteins of breast milk
PMA3_22980
Exosomal proteins of breast cancer cells
PMA3_22980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ANJ57867
UniProt:
A0A191YY99
LinkDB
All DBs
Position
complement(5175560..5177248)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDQGAYQSVIEVFERSCKKFADRPAFSNMGITLTYAELERYSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLADTDIQYLIEAKMGDLMPAAKGWLVNTLVSKVKKMVPAYA
LPQAVSFKSALRLGRGLGIKPLNAGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQAR
ACLGQFGTDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQLTGCR
ITEGYGLTETSPVACTNPYGDKSRIGTVGLPVPGTTLKVINDDGVEQALGERGELCIKGP
QIMKGYWQKPEATAEVLDTEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGLNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggccggcgtgcccctggacatcgaccaa
ggggcctatcagtcggtgatcgaggtgttcgagcgttcctgcaagaaatttgccgaccgc
ccggccttcagcaatatgggcatcaccctgacctacgccgaactggaacgctacagcgcc
gcgttcgccggttacctgcaagcccacaccgacctggtgccgggtgatcgcatcgcggtg
cagatgcccaacgtcctgcattacccgattgccgtgttcggcgccttgcgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgctcgggagatgcgccatcaattcaaggac
tccggtgcccgggcgctggtgtacctgaacatgttcgggcagaaggtccaggaagtgctg
gccgacaccgacatccagtacctgatcgaagcgaagatgggcgacctgatgcccgcggcc
aagggctggctggtcaataccctggtgagcaaggtcaagaaaatggtcccggcctacgcc
ttgccccaggccgtttccttcaagagcgcgctgcgtctgggccggggcctgggcatcaag
ccgctgaatgccggtctggacgacatcgcagtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcgatgctgacccatggcaacctcgtcgccaacatgcagcaggcgcgg
gcctgcctggggcagttcggcaccgatggtcaacccctgctgcgcgaagggcaggaggtg
atgatcgcgccattgccgctgtaccatatctatgccttcacggcgaactgcatgtgcatg
atggtgaccggtaaccataacgtgctgatcaccaatccacgggatatcggcggtttcatc
aaggagctgaagaactggcggttttcggcgctgctggggctcaacacgctgttcgtcgcg
ctgatggaccatcccgacttcaagaccctggatttctccagcctgaaactcaccaactcc
ggcggtaccgcgctggtcaaggccacggccgaacgctgggaacagctgaccggttgccgc
atcaccgaaggttacggcctgaccgaaacctcgccggtggcctgcaccaatccgtacggc
gacaaatcgcgcatcggcacggtcggcctaccggtgccgggcaccacattgaaagtgatc
aacgatgacggcgtcgagcaggccttgggcgagcgcggcgaactgtgcatcaagggcccg
cagatcatgaagggttattggcagaaacccgaagccaccgccgaagtgctggataccgag
ggctggttcaagtccggcgacattgcggtgatcgacccggacggtttcgtgcgcatcgtc
gaccgcaagaaagacatgatcatcgtctcgggtttgaacgtgtacccgaacgagatcgag
gacgtggtgatggcccacccgaaagtcgccaactgtgcggtgatcggcgtgccggacgag
cggtcgggggaggcggtgaagctgttcgtggtggcccgggaaacgggggtcagccttgaa
gagctcaaggcctactgcaaggaaaacttcacggcgtacaaggtgcccaagcacatcgtg
ttgcgtgagtcgttgcctatgacgccggtgggcaagattttgcggcgggagttgcgcgat
attgcctga
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