Pseudomonas silesiensis: PMA3_25450
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Entry
PMA3_25450 CDS
T05412
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psil
Pseudomonas silesiensis
Pathway
psil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMA3_25450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psil03019
]
PMA3_25450
03016 Transfer RNA biogenesis [BR:
psil03016
]
PMA3_25450
Enzymes [BR:
psil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PMA3_25450
Messenger RNA biogenesis [BR:
psil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PMA3_25450
Transfer RNA biogenesis [BR:
psil03016
]
Prokaryotic type
tRNA degradation factors
PMA3_25450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
ANJ58338
UniProt:
A0A191Z024
LinkDB
All DBs
Position
complement(5742346..5744451)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQPEA
TALLGAIRAEFGDAISQAYTITIKADRYARLGELKDQVVAKLSGEEGQPSSSEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSIAAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggtgcagtattggtcaccgttgacgacgacgtcagcgtg
ttggtgactgtcgtcggtgccaagcaagccgatccaggcaagggcttcttccccctgtcc
gttcactaccaggaaaagacttacgccgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgaaaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccggaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatt
tccggcatcccgtttgatggcccgatcggcgctgcccgcgttgctttccacgaaagcacc
ggctacctgctgaacccgacttacgaacaacagaaagcctcgagcctggacatggtcgtt
gccggtacgtcggaagccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgtttgctcacgacgagttccaggttgtgatcaacgccgtt
aaagaactggccgctgaagctgccaagccgacctggacctgggctcctcagccagaagcc
accgcgctgctgggcgctatccgtgccgaattcggcgacgcgatctcccaggcttacacc
atcaccatcaaggccgaccgttacgctcgcctgggcgaactgaaagaccaggtcgttgcc
aagctgtccggtgaagaaggccaaccttcttccagcgaagtcaaagctgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgtaaacggcaagccacgtatcgacggccgc
gacaccaagaccgtacgtcctttgaacatcgaagtcggcgttctgccaaagacccacggt
tcggcactgttcacccgtggcgaaacccaggctctggtcgttgcaacgctgggtactgcc
cgtgacgcgcagctgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtaggcgagtgtggtcgcatgggtggcgccggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcgattgcagccatgctgcctgctgccgac
gtgttcccgtacaccatccgtgtggtgtcggaaatcaccgagtccaacggttcgagctcc
atggcttcggtctgcggcgcttccctggccttgatggatgccggcgttccgatgaaggca
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaaattcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagcgggtaccgcc
aaaggcgtgaccgcgctgcagatggacatcaagatcaaaggcatcaccgaagaaatcatg
gagatcgctctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgtaccgagctgtcggaaaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccattcgtgcgatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggctgaagcagcacgtcagcgcgttctgggcatcaccgctgaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgcctggcaaggacggtctggttcacatctcgatgctgagcgacgctcgcgtt
gagaaagtgaccgacatcctcaaggaaggccaagaagtggaagtactggtactggacgtg
gataaccgcggccgtatcaagctgtccatcaaagacgtagcagcggccaaggcttcgggc
gtttaa
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