Pseudomonas silesiensis: PMA3_28130
Help
Entry
PMA3_28130 CDS
T05412
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psil
Pseudomonas silesiensis
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psil03009
]
PMA3_28130
Enzymes [BR:
psil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PMA3_28130
Ribosome biogenesis [BR:
psil03009
]
Prokaryotic type
rRNA helicases
PMA3_28130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
ESX-1_EspG
CMS1
PRAI
Motif
Other DBs
NCBI-ProteinID:
ANJ58816
UniProt:
A0A191Z1I9
LinkDB
All DBs
Position
6344125..6345510
Genome browser
AA seq
461 aa
AA seq
DB search
MTTIATAFNTLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPINPRFFGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIG
SLEHGAHIIVGTPGRLQQHLRKGSLVLHGLNTLILDEADRMLDMGFYDSIEEIIAQTPER
RQTLLFSATYPTGIKQLAAKFMRTPQIVKAEAFHDDTQIEQRFYEISPEERMDAVVKVLG
HHRPASCVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAISLVAPSEAHRAQAIE
LLQKSPLSWDQLDNLKSQGGAPLLPVMSTLVIGAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaatactttgccgctgtccgccgccatgctggctaac
ctcgactccctcggttatgcccagatgacgccgatccaggcgcaaagcttgccggtgatc
ctcaaggggatggacctgatcgcccaggcgaagaccggcagcggcaagaccgccgccttc
ggtatcggcctgttgaacccgatcaatccgcgcttcttcggttgccaggcgctggtcatc
tgtccgacccgtgagctggctgaccaggtcgccaaggaaatccgtcgcctggcccgtgcc
gaagacaacatcaaggtcctgactctgtgcggcggcgtgtcgttcggtccgcagatcggt
tctctggagcacggcgcgcacatcatcgtcggcaccccgggccgcctccagcagcatttg
cgcaaaggttcgctggtgctccatggcctgaacacgctgatcctcgacgaagccgaccgc
atgctcgacatgggcttctacgactccatcgaagaaatcattgcccagaccccagagcgt
cgccagaccctgctgttctccgccacgtacccgacgggtatcaagcagttggcagcgaaa
ttcatgcgcacccctcagatcgtgaaggccgaggcgttccacgacgacacgcagatcgag
cagcgtttctacgagatttccccagaagagcgcatggacgccgtggtcaaagtcctcggg
catcatcgtccggcctcctgtgtcgccttctgcttcaccaagcagcaggttcaggaaacc
gttgatcacctgacctccaaaggtatctctgccgtcggcctgcatggcgatctggaacaa
cgtgaccgtgaccaggtactggccatgttcgccaaccgcagcacctcggtgctggttgct
accgacgtcgccgctcgcggcctggacatcgatgcgctggacatggtgatcaacgtcgaa
ctggcccgtgattcggaaatccacatccaccgtgtgggccgtaccggtcgtgctggtgag
aaaggtattgcgatcagcctggtcgcaccgtccgaagcgcaccgcgcccaagccatcgag
ctactgcagaagtcgccgttgagctgggatcagctggacaacctcaaatcccagggcggc
gcaccgctgctgccggtgatgagcacgctggtcattggcgctggccgtaaagacaaggtt
cgtccgggcgacattctgggcgcactgacgggcgatgccgggattccgggggcccaggtg
ggcaagatcgcgattttcgacttccaggcttatgtggctgtggaacgcgggatcgccaag
caagccttgcagcgcctgaacgacggcaagatcaagggtcgttcgctgcgcgtgcgtatc
ctgtaa
DBGET
integrated database retrieval system
