Pseudomonas silesiensis: PMA3_28615
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Entry
PMA3_28615 CDS
T05412
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psil
Pseudomonas silesiensis
Pathway
psil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMA3_28615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psil03400
]
PMA3_28615
Enzymes [BR:
psil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PMA3_28615
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PMA3_28615
DNA repair and recombination proteins [BR:
psil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMA3_28615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ANJ58910
UniProt:
A0A191Z145
LinkDB
All DBs
Position
complement(6446738..6447550)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEAGLPAAKHEHVDIELESGLALRYTDPRRFGAMLWSLD
PLNHELLIRLGPEPLTDLFDGERLFQLSRARSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAKSISRARYLKLAIEIKRILAHAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GNEHCKICASQLREVKLGQRASVFCPRCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaagtcgaaaccacccgccgcgggattgcgccacaccttgagggc
cagcgcgtcagccgggtcatcgtgcgggatcgtcgtctgcgttggccgatcccggaagac
ctcgatgtgcggctgtccggccagcgcatcgtgttggtggagcgacgggccaagtatttg
ctgatcaatgccgaagtcggcacgctcatcagtcatttggggatgtcgggcaatttacgt
ctggtggaagccggcctgccggcggccaagcatgaacatgtggatatcgagctggaatcg
ggcctggccctgcgctataccgacccgcgccggtttggtgcgatgctctggagtctcgat
ccgctcaaccacgaattactgattcgcctggggccggagcccttgactgacctgttcgat
ggcgagcgcttgtttcagctgtcgcgagcgcgctccatggcagtcaagccgttcatcatg
gacaacgcggtcgtggtcggtgtcggcaatatctacgcaaccgaagcgctgttcgccgcc
ggcatcgatccgcgccgggaggcgaaaagcatttcccgggcgcgctatctgaagttggcg
atagagatcaaacgcatacttgcacacgccattgagcgcggcggcaccacattgcgcgat
tttatcggcggtgacggccagcccggttacttccagcaggaattgttcgtttacggtcgc
ggtaacgagcattgtaagatctgcgcatcgcaattgcgggaagtaaaactcgggcagcgt
gccagtgtgttttgcccgcgttgtcaaagctga
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