Pseudomonas silesiensis: PMA3_29825
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Entry
PMA3_29825 CDS
T05412
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psil
Pseudomonas silesiensis
Pathway
psil03420
Nucleotide excision repair
psil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMA3_29825 (uvrD)
03430 Mismatch repair
PMA3_29825 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psil03400
]
PMA3_29825 (uvrD)
Enzymes [BR:
psil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMA3_29825 (uvrD)
DNA repair and recombination proteins [BR:
psil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMA3_29825 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PMA3_29825 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANJ59146
UniProt:
A0A191Z2H8
LinkDB
All DBs
Position
6708482..6710665
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSDDFPDAETIRLEQNYRSTAGILKAANALIA
NNAGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRLLVANKGLTGRAAGALGAFIELIENLAAKCMEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENAEEDEDLSPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREIPKGLIQEVRLSNSVSRPFGGGQ
QQSSSSLFGGSEIPDTGFSLGQTVRHSVFGDGVILNFEGAGAQARVQVNFNEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gctgcctccgtgggtcgtcagttggtcctggccggtgctggttccggtaaaacccgagtg
ttggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgccccactcgatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccatcgcatcgagcagctgatg
ggtatcaacccggccggcatgtgggtcggcactttccacggcctggcgcaccgcttgttg
cgggcgcattggcaagaagccgggctgagccagactttccagattctcgacagcgacgac
cagcagcgactggtcaagcgggtgatccgcgaactgggcctggacgagcaacgttggccg
gcccgtcaagcccaatggttcatcaacgggcagaaagacgaaggtctgcgcccgcaacac
atccaggccagcggcgacttgttcctggccaccatgcgcagcatctacgaagcctacgag
gccgcgtgcctgcgcgctggcgtcatcgacttctccgaactgttgctgcgtgccctcgac
ctgtggcgcgatcatccgggcttgcttgcgcattatcaaaagcgcttccgccacattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctacgtctgctggccaag
ggcggcgacagcctgatggtggtcggcgatgacgatcagtccatctacggctggcgcggt
gcgaaaatcgaaaacatttatcagtattcggacgattttccggacgccgagaccattcgg
ctggagcagaactaccgctccaccgccggaattctcaaggctgccaacgccctgatcgcc
aacaatgccggacgcatgggtaaagagctgtggaccgacggcggtgaaggcgaagcgatc
aatctatacgcagccttcaatgaacacgatgaagcacgctacgtggtggaaaccattgaa
agcgcgctgaaaaccggcctggcgcgcagtgatattgcgattttgtaccgttccaacgcc
caatcgcgcgttttggaagaagccttattgcgcgagcgcattccctatcgcatctatggc
ggccagcgctttttcgagcgggctgaaatcaagaacgccatggcctacctgcgtttgctg
gaaggtcgtggcaacgatgcggcgctggaacgggtgatcaacgttccggcccgtggtatc
ggcgaaaaaaccgtcgaagcgatacgcgaccatgcccgtcacagcgatgtatcgatgtgg
gaagccatgcgactgctggtcgccaataaaggcctgaccgggcgcgctgcaggcgccctg
ggggcctttatcgagctgatcgagaatctggccgccaaatgcatggaaatgcccctgcac
ctgatgacccagacggtcatcgagcagtcggggctgattgcttaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgcggcgcgcaac
ttcgaaaacgctgaagaagatgaagacttgtcgccattggcagcgttcctcggtcatgca
tcgctggaggcgggcgatacccaggccgacgagcacgaagacagcattcagttgatgacc
ctgcacagtgccaaaggcctggaattcccttatgtattcctggtgggcatggaagaaggc
ctcttcccgcacaagatgagcctggaagaacccggccgtctcgaggaagagcgccgcctg
gcctatgtcggcatcacccgggcgatgcagaacctggtgatgacttatgctgaaacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgtttcgtacgggaaataccgaaa
ggcttgattcaggaagtgcgcctgtccaacagcgtcagccgtccgttcggcggtggtcag
cagcagagctccagcagtctgtttggtggcagcgagatcccggacaccgggttcagcctg
ggccagaccgttcggcattcggtgtttggcgacggcgtgatcctgaacttcgaaggtgcc
ggggctcaggcccgggtccaggtgaacttcaacgaaggcagcaagtggctgatgctcggc
tacgccaagctggaagcgatctga
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