Pimelobacter simplex: KR76_02970
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Entry
KR76_02970 CDS
T03528
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psim
Pimelobacter simplex
Pathway
psim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR76_02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_02970
Enzymes [BR:
psim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR76_02970
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR76_02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
AIY15980
UniProt:
A0A0A1DKV0
LinkDB
All DBs
Position
607121..610312
Genome browser
AA seq
1063 aa
AA seq
DB search
MRFLQPASLVGLLLGRDRDDPWQPDRLVWPLLATIDDNLGEPWCATLATHLGHGVDGEEG
ELRRSRRWSVARRLAERLTSYAVQRPALVRDWREGRDTDGAGAPLADDLRWEAELWRRLL
VRMAEAGHDEAPDVRHERVCAALLAGTVDGLDLPDRLSLFGHTRLPATEIDLLVALAAHR
DVHLWLSQPSAALWDAVAAAGVEVGPRDTSSTAELAENPLLASLGRDARELATVLSARVR
AGQADDAGAAPDPAPPAGLLGWLQADLRANRAPDAEARSGRVLAADDRSVQVHACHGPAR
QIEVLRELLVGLLEDDPTLEPRDIVVMCPDIETYAPLISAGFGLGELIGDEHADDALHPA
HRLRVRLADRAASSTNPLLGVAVALVELAGGRATASQVLDLLSRAVCRRRFGFGDDDLAR
MTRWVAEAGIRWGVDAGHRASYAMEGFEHNTWRAGLDRLLLGVAMSDDDHRHVGRGLPVD
DIASGEIELVGRLSEAVARLAGCLDALDRAQAADAWFAAIADGVRDLCEVDADDAWQLPQ
FERELARARASADESDPDVPLRLADVRALLQARLAGRPTRANFRTGTLTVCTMVPMRSVP
HRVVCLVGLDDGVFPRTSGVDGDDVLARRPLVGERDLRGEDRQLLLDAVLAAGERLIITY
TGAAEHTGQERPPAVPLGELVDALDRTAAAPVRDAVVVRHPLQAFDPRNHAAGALLGTGP
FSFDRASLAGARAAVRERTPVPPFLADPLPPAPAAGGDVALADLVGFVHRPARTFLRQRL
DVATPFEPDQVADAIPVALNGLEVWQIGDRLLREVLAADDPAATATAVMTAEQLRGSLPP
FDLGRAALTGVVKECQELFARSAPLRTGTPRTIDIDVDLGGGRRLTGTVPRVHGNQVVSL
SYSRLKPKQRLASWLDVLALSATHPDENWTGHAVARAKAGPQRALVGPLDHRATEWLHAL
VALYDEGLTRPLPMPLDTAYAWADARAKELRGMDIEPVEAAARAWVTDRFNQWGIKGEDD
DPAHRRIYGHSAPVTALVDAGLASYAWTLWEPLLAGAERVGQL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttcctccagccggcctcgctcgtggggctgctgctgggccgcgaccgcgacgat
ccgtggcagcccgaccgcctggtctggccgctgctggcgacgatcgacgacaacctcggc
gagccgtggtgcgcgacgctcgcgacccacctcgggcacggggtcgacggcgaggagggc
gagctgcggcgcagccgccggtggtcggtcgcccggcggctggccgagcgcctcacgtcc
tacgccgtccagcggccggcgctcgtgcgcgactggcgcgagggccgcgacaccgacggc
gcgggcgcgccgctggccgacgacctgcgctgggaggccgagctgtggcggcggctgctg
gtgcggatggcggaggccgggcacgacgaggcgcccgacgtgcgccacgagcgggtctgc
gcggcgctgctcgccggcaccgtcgacgggctcgacctgcccgaccggctgtcgctgttc
ggccacacccggctgcccgcgaccgagatcgacctcctcgtcgcgctggccgcccaccgc
gacgtccacctgtggctgtcgcagccgtcggccgcgctgtgggacgccgtcgcggcggcg
ggcgtcgaggtcgggccgcgcgacacgtcgagcaccgccgagctcgccgagaacccgctg
ctcgcctcgctggggcgcgacgcgcgcgagctggcgacggtgctgagcgcccgggtgcgc
gccggccaggccgacgacgcgggggcggcgcccgacccggccccgcccgccggcctgctc
ggctggctccaggccgacctgcgtgccaaccgggcgcccgacgccgaggcgcggtcgggg
cgcgtgctcgcggccgacgaccggtcggtccaggtccacgcctgccacggtccggcccgg
cagatcgaggtcctgcgcgagctgctggtcggtctgctcgaggacgacccgaccctcgag
ccccgcgacatcgtcgtgatgtgccccgacatcgagacctacgcgccgctcatctcggcc
ggcttcggcctgggcgagctgatcggcgacgagcacgccgacgacgccctgcaccccgcc
caccggctgcgggtccggctggccgaccgcgcggccagcagcaccaacccgctgctcggc
gtggcggtcgcgctcgtcgagctcgccggcggccgggccaccgcctcccaggtgctcgac
ctgctctcgcgggcggtgtgccggcgccggttcgggttcggtgacgacgacctggcgcgg
atgacgcgctgggtcgccgaggccggcatccgctggggcgtcgacgcgggccaccgggcg
tcctacgcgatggagggcttcgagcacaacacctggcgggccgggctcgaccggctcctg
ctcggcgtcgcgatgagcgacgacgaccaccgccacgtcgggcgcgggctgcccgtcgac
gacatcgccagcggcgagatcgagctggtcggccggctcagcgaggccgtcgcccggctc
gccggctgtctcgacgcgctcgaccgggcgcaggccgccgacgcctggttcgcggcgatc
gccgacggcgtgcgcgacctgtgcgaggtcgacgccgacgacgcctggcagctgccgcag
ttcgagcgcgagctcgcgcgggcccgggcgagcgccgacgagagcgaccccgacgtcccg
ctgcggctggccgacgtccgcgcgctgctccaggcccggctcgcggggcggcccacgcgc
gccaacttccgcaccggaacgctcaccgtctgcacgatggtcccgatgcgctcggtgccg
caccgggtggtctgcctggtcggcctcgacgacggcgtgttcccgcgcaccagcggcgtc
gacggcgacgacgtcctggcccggcgcccgctcgtcggcgagcgcgacctgcgcggcgag
gaccgccagctcctcctcgacgccgtcctcgcggcgggcgagcggctgatcatcacctac
accggcgccgccgagcacacgggccaggagcggccgcccgccgtaccgctgggcgagctg
gtcgacgcgctcgaccgcacggccgccgctccggtgcgcgacgcggtcgtcgtccggcac
ccgctccaggccttcgacccgcgcaaccacgccgccggggccctgctgggcaccggaccg
ttcagcttcgaccgggcctcgctggccggcgcccgggccgcggtccgcgagcggacgccg
gtgccccccttcctcgccgacccgctgccgccggcgcctgccgcgggcggcgacgtcgcg
ctcgccgacctggtcggcttcgtgcaccgcccggcgcggacgttcctccggcagcggctc
gacgtcgcgacaccgttcgagcccgaccaggtcgccgacgcgatccccgtcgccctcaac
ggcctcgaggtctggcagatcggcgaccggctgctgcgcgaggtgctcgccgccgacgac
ccggccgcgaccgcgaccgccgtgatgaccgccgagcagctgcgcggctccctgccgccc
ttcgacctcgggcgggccgcgctgaccggcgtggtcaaggagtgccaggagctgttcgcc
cgcagcgccccgttgcgcaccggcacgccccgcaccatcgacatcgacgtcgacctgggc
ggcggacgccggctcaccggcaccgtcccgcgggtccacggcaaccaggtcgtctcgctg
tcctactcccggctcaagcccaagcagcggctggcctcctggctcgacgtcctcgcgctc
agcgccacccaccccgacgagaactggaccggccacgccgtggcccgggccaaggccggt
ccgcagcgcgcgctcgtcggtcctctcgaccaccgggcgaccgagtggctccacgccctc
gtcgcgctctacgacgaggggctcacccggccgctgccgatgcccctggacaccgcctac
gcctgggccgacgcccgcgccaaggagctgcgcggcatggacatcgagcccgtcgaggcc
gccgcacgcgcctgggtgaccgaccggttcaaccagtggggcatcaagggcgaggacgac
gaccccgcccaccgccgcatctacgggcactccgcgccggtgaccgcgctcgtcgacgcc
gggctggcgtcctacgcctggacgctgtgggagccgctcctcgccggtgccgagagggtg
ggtcagctatga
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