Pimelobacter simplex: KR76_02975
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Entry
KR76_02975 CDS
T03528
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psim
Pimelobacter simplex
Pathway
psim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR76_02975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_02975
Enzymes [BR:
psim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR76_02975
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR76_02975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AIY19677
UniProt:
A0A0A1DSS7
LinkDB
All DBs
Position
610309..613692
Genome browser
AA seq
1127 aa
AA seq
DB search
MNTPMTPFDIRGPLPTGTTLLEASAGTGKTWTIGALVTRYVAEEGVPLEQLLVVTFGRAA
SQELREQVRHQLVEAERALAGAPGDEPTDVIEQLLDGTPDERRLRHRRVAQALADFDAAT
IATIHQFCSLVLDSLGVAGDTDARARLVDNLDDMLVEVVDDLYLRAFAQTSEAPAFTHAE
ALAIARTVVADPQAHLEPTDVPRDQPAGRKVAFATAVRAELDRRKRRLGVLSYDDLLSQL
AEALEHPASPARARMRARWRIVLVDEFQDTDPVQWQVFDRAFTGHATMVLIGDPKQAIYA
FRGGDVTTYLAAAETAQVKQTLGVNRRSDAGLIGAFQQLLGGAELGDPRIVVHDVTAHHQ
ESRLTGAPRPAPFRLRVVRRETFGKRGTTALPVAKVRPHIARDLAHDVRELLAAEPVFDG
RPLRPDDVAVICYRHADLAAARAALLDVGVPAVIAGGGSVFATPAATEWLSLLEALEQPH
RTPRVRAAALTCFLDYDATGLDAGGDDLSDELGDRLRSWSEALARRGVAAVLEAATSGGL
PARLLGQVGGERTLTDIRHVGEVLHEVAQRDQLGAVALLAWLRQQVLEAREGRGTERTRR
LDSDADAVQLVTIHASKGLQYPVVYLPSLADRWVGKPDRPLFHDADGRRSLDVGGSGPHW
AEHCRRWADEEAGEWLRLLYVALTRAQSQVVAWWAPTRNAEASPLHRLLLREPAADGSGL
RAEVPPLPPLPDEDAVTHLFATWRDRGGPQPEVAEPVPLTTALPDEPSAALAARTFTRSV
DTEWRRTSYSALSRVDLGSADAAAAVGSEPEVAVKDDEELPDLPATVLPDATADPALAVP
SPMAGLPVGATFGSLVHGVLEHADPGVADLRAELLTQIAEQLTWWPVDLDPAELADALVA
VLDTPLGPLLDDTTLRAIGTADRLCELDFELPLVGGDDPAARAGQTVLLGDMAALLRRHL
PEGDPVRAYADHLDHPLLGGQVLRGYLTGSVDVVLRLRDAAGDARYVVVDYKTNWLGPMA
AELDGPLTAGAYRPAALDEAMGHSDYPLQALLYAVVLHRFLRWRQPGYDPARHFGGVVYL
YLRGMCGPDTPRVDGAPTGVFTWQPPVALVTALSDLLDGASPQEAGR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccccgatgacgccgttcgacatccgcggcccgctgcccaccggcaccaccctg
ctcgaggccagcgccggcaccggcaagacctggacgatcggcgccctggtcacccgctac
gtcgccgaggagggcgtgccgctcgagcagctgctcgtcgtcacgttcgggcgagcggcg
agccaggagctgcgcgagcaggtccggcaccagctggtcgaggccgagcgggcgctggcc
ggtgctccgggcgacgagccgaccgacgtcatcgagcagctcctcgacggcacgcccgac
gagcggcggctccggcaccggcgggtggcgcaggcgctggccgacttcgacgccgccacg
atcgccacgatccaccagttctgctcgctggtgctcgactcgctgggcgtcgcgggcgac
accgacgcgcgggcccggctggtcgacaacctcgacgacatgctggtcgaggtcgtcgac
gacctctacctgcgggcgttcgcccagaccagcgaggcgccggcgttcacccacgccgag
gcgctcgccatcgcgcggaccgtggtcgccgacccgcaggcccacctcgagcccaccgac
gtcccgcgcgaccagccggccgggcgcaaggtcgccttcgccacggccgtgcgggccgag
ctcgaccggcgcaagcgccggctcggtgtgctgtcctacgacgacctgctctcgcagctt
gccgaggcgctcgagcacccggcgtccccggcccgcgcgcggatgcgcgcccgctggcgc
atcgtgctcgtcgacgagttccaggacaccgaccccgtgcagtggcaggtgttcgaccgg
gcgttcaccggtcacgcgaccatggtgctcatcggcgaccccaagcaggcgatctacgcc
ttccgcgggggagacgtgacgacctacctcgccgccgccgagacggcccaggtcaagcag
accctgggcgtcaaccggcgcagcgacgccggtctgatcggcgccttccagcagctcctc
gggggcgccgagctcggcgacccgcgcatcgtcgtccacgacgtgaccgcgcaccaccag
gagtcccggctcaccggggccccacggcccgcgcccttccggctgcgggtggtgcggcgc
gagacgttcggcaagcgcggcacgacggcgctgccggtggccaaggtccgtccgcacatc
gcgcgcgacctggcccacgacgtccgcgagctgctcgcggccgagccggtcttcgacggc
cgcccgctgcgccccgacgacgtcgcggtgatctgctaccgccacgccgacctggcggcc
gcccgcgcggccctgctcgacgtcggcgtcccggccgtcatcgccggcggcggcagcgtc
ttcgcgacgcccgccgccaccgagtggctctcgctgctcgaggcgctcgagcagccgcac
cgcacgccacgggtccgggcggcggcgctcacctgcttcctcgactacgacgccaccggg
ctcgacgccggcggcgacgacctctccgacgagctgggcgaccggctgcggtcgtggtcc
gaggcgctggcccggcgcggcgtcgccgccgtcctcgaggctgcgacgtcgggcgggctg
ccggcccggctgctcggccaggtcggcggcgagcggaccctgaccgacatccgccacgtc
ggcgaggtgctccacgaggtcgcccagcgcgaccagctcggcgcggtggcgctgctcgcc
tggctgcgccagcaggtgctcgaggcgcgcgagggccgcggcaccgagcggacccgccgg
ctcgactccgacgccgacgcggtccagctcgtgacgatccacgcgagcaagggcctgcag
tacccggtcgtctacctgccctcgctcgccgaccgctgggtcggcaagcccgaccggccg
ctcttccacgacgccgacgggcggcgcagcctcgacgtcggcggctccggcccgcactgg
gccgagcactgccggcgctgggccgacgaagaagcgggcgagtggctgcggctgctctac
gtcgcgctcacccgcgcccagagccaggtcgtggcgtggtgggcgccgacccgcaatgcc
gaggcctcgccgctccaccggctgctgctgcgcgagcccgcggccgacgggtccgggctg
cgggccgaggtgccgccgctcccgccgctgcccgacgaggacgccgtcacccacctgttc
gccacctggcgcgaccggggcgggccccagcccgaggtcgccgagccggtgccgctcacc
accgcgctccccgacgagccgtccgccgcgctcgccgcccgcacgttcacccgcagcgtc
gacaccgagtggcgccgcacgtcctactcggcgctcagccgggtcgacctcggctctgcc
gacgctgcggccgccgtgggcagcgagcccgaggtggcggtcaaggacgacgaggagctg
cccgacctgccggccacggtgctgcccgacgcgacggccgacccggcgctcgccgtcccg
tcgccgatggcggggctgccggtcggcgcgaccttcggctcgctggtccacggcgtcctc
gagcacgccgaccccggtgtggccgacctgcgtgccgagctgctcacccagatcgccgag
cagctgacctggtggccggtcgacctcgacccggccgagctggccgacgcgctggtcgcc
gtcctcgacacgccgctggggccgctgctcgacgacacgacgctgcgcgccatcggcacc
gccgaccggctctgcgagctcgacttcgagctcccgctcgtcggcggcgacgaccccgcc
gcgcgggccgggcagacggtgctcctcggcgacatggccgcgctgctgcgccggcacctg
cccgagggcgacccggtccgcgcctacgccgaccacctcgaccacccgctgctcggcggc
caggtgctgcgcggctacctgaccgggtcggtcgacgtcgtgctgcggctgcgcgacgcc
gccggcgacgcccgctacgtcgtcgtcgactacaagaccaactggctcggcccgatggcc
gccgagctcgacggtccgctgaccgccggggcctaccgtcccgcggcactcgacgaggcg
atgggccactccgactacccgctgcaggcactgctctacgccgtcgtgctccaccgcttc
ctgcgctggcgccagcccggctacgaccccgcacgccacttcggcggcgtcgtctacctc
tacctgcgaggcatgtgcgggcccgacacgccccgcgtcgacggcgcgccgacgggcgtc
ttcacctggcagccgccggtcgccctcgtcaccgcgctctccgacctgctcgacggcgcg
tccccccaggaggccggccggtga
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