Pimelobacter simplex: KR76_02980
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Entry
KR76_02980 CDS
T03528
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psim
Pimelobacter simplex
Pathway
psim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR76_02980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psim03400
]
KR76_02980
Enzymes [BR:
psim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR76_02980
DNA repair and recombination proteins [BR:
psim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR76_02980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
RecD_N
UvrD-helicase
AAA_22
SH3_13
nSTAND3
PhoH
nSTAND_NTPase5
AAA_28
DEAD
Herpes_Helicase
AAA_25
NACHT
SLFN-g3_helicase
RNA_helicase
NTPase_1
AAA_7
AAA_16
TraI_hel_assoc_N
Mg_chelatase
TrwB_AAD_bind
DO-GTPase1
MukB
ATPase
Motif
Other DBs
NCBI-ProteinID:
AIY19678
UniProt:
A0A0A1DSZ0
LinkDB
All DBs
Position
613689..615473
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AA seq
594 aa
AA seq
DB search
MTEIFEPTSPHDPRLARGVGGLLGAFNAAGVVDAADVRVAERVAALAHEDDERVRLAAAL
AVRSVRAGSVGLDLAALPDLAELDRTADLSWPEPAAWTAAIEGSALVAAGVLHVEHDLVY
LDRYHRLERQVADDLAARIALGPPAVDDAVLADTLRRVSGAHLSPEQAAAVEHAARHRTT
VLTGGPGTGKTTTVARLVLALADQFAVAHQRRMSVALAAPTGKAATRLHEAVGAELAALG
ALGDGEHQVAVPEAMTLHRLLGWRPDNTTRFRHGRDDRLKYDLVVVDEASMVDLTMMARL
LEAVRPETRLVLVGDPRQLTSVGAGAVLSDLVAGFAGHPDSPVVALTENHRSTEQIKDLA
AALRDDSPHAADRVLAVLRAGTGEVAYVETDDPVEALRDECTAAAVRVREAAVERGPEAA
LAEIERFRLLCAHRDGPYGVHVWNRHVEQWLAAELAAPLGSAWYAGRPLLVTTNDYALDI
YNGETGVVVADPSGRPRAWIAGAGVPRPFAPGRLDAIETMHAMTIHKSQGSQATRIAVLL
PDEGSRLLTRELFYTAVTRARESVLVVGSEAAVRAAVGTTAQRATGLRQRLAPA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagatcttcgagcccacctcgccgcacgacccgcggctggcccgcggtgtcggc
ggcctgctcggcgcgttcaacgcggcgggcgtggtcgacgcggccgacgtacgggtcgcc
gagcgggtggccgcgctcgcccacgaggacgacgagcgggtccggctcgcggccgcgctc
gccgtccgctcggtgcgggcgggctcggtcggtctcgacctcgccgcgctgcccgacctc
gccgagctcgaccgcacggccgacctgtcctggcccgagcccgccgcgtggactgccgcg
atcgagggctccgccctcgtcgccgccggggtgctccacgtcgagcacgacctggtctac
ctcgaccgctaccaccgcctcgagcggcaggtcgccgacgacctcgccgcccggatcgcg
ctcggcccgcccgccgtcgacgacgccgtgctcgccgacacgctgcgccgggtcagcggc
gcgcacctcagccccgagcaggccgccgcggtcgagcacgccgcgcggcaccggacgacg
gtcctcaccggcgggcccggcaccggcaagaccaccacggtcgcccgcctcgtcctcgcg
ctcgccgaccagttcgcggtcgcccaccagcggcggatgtcggtggcgctcgccgcgccc
accggcaaggccgcgacccggctgcacgaggcggtgggtgccgagctcgcggcgctgggg
gcactcggtgacggggagcaccaggtcgccgtacccgaggcgatgacgctgcaccgcctg
ctcggctggcgccccgacaacaccacccggttccggcacggccgcgacgaccggctcaag
tacgacctggtggtcgtcgacgaggcgtcgatggtcgacctgacgatgatggcccggctg
ctcgaggcggtccgtcccgagacccggctcgtcctcgtcggcgacccgcgccagctcacc
tccgtcggcgcgggcgcggtgctctccgacctcgtcgccggcttcgccggccacccggac
tcgccggtcgtcgcgctcaccgagaaccaccgctccaccgagcagatcaaggacctcgcc
gccgcgctgcgcgacgactcgccccacgcggccgaccgggtgctcgccgtcctgcgggcc
ggcaccggcgaggtggcctacgtcgagaccgacgacccggtcgaggccctccgcgacgag
tgcacggcggcggcggtccgggtccgcgaggccgcggtcgagcgcgggcccgaggcggcc
ctcgccgagatcgagcgcttccggctgctctgtgcgcaccgcgacgggccctacggcgtc
cacgtctggaaccggcacgtcgagcagtggctcgccgccgagctcgccgcgcccctcggc
tccgcctggtacgccggccgtcccctgctcgtcaccaccaacgactacgcgctcgacatc
tacaacggcgagaccggcgtcgtcgtcgccgacccgtccgggcgcccccgcgcctggatc
gccggggccggcgtcccgcgccccttcgcccccggccggctcgacgcgatcgagacgatg
cacgcgatgaccatccacaagagccagggcagccaggccacccggatcgcggtgctgctg
cccgacgagggctcgcggctgctgacccgcgagctgttctacaccgcggtcacccgggcg
cgcgagagcgtgctcgtcgtcggctccgaggccgccgtacgcgccgcggtcggcaccacc
gcgcagcgcgccaccggcctgcgccagcgcctcgcccccgcctga
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