Pimelobacter simplex: KR76_03625
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Entry
KR76_03625 CDS
T03528
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psim
Pimelobacter simplex
Pathway
psim00061
Fatty acid biosynthesis
psim00071
Fatty acid degradation
psim01100
Metabolic pathways
psim01212
Fatty acid metabolism
psim02024
Quorum sensing
psim04146
Peroxisome
Module
psim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KR76_03625
00071 Fatty acid degradation
KR76_03625
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KR76_03625
09145 Cellular community - prokaryotes
02024 Quorum sensing
KR76_03625
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psim01004
]
KR76_03625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psim04147
]
KR76_03625
Enzymes [BR:
psim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KR76_03625
Lipid biosynthesis proteins [BR:
psim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KR76_03625
Exosome [BR:
psim04147
]
Exosomal proteins
Exosomal proteins of breast milk
KR76_03625
Exosomal proteins of breast cancer cells
KR76_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIY16076
UniProt:
A0A0A1DFM6
LinkDB
All DBs
Position
755573..757177
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AA seq
534 aa
AA seq
DB search
MSQQDAPATPDVAALVAAAAADHPDRLAVVEAGGRGLTWAELDDEVSRVATGLGAAGVLA
GHRVMIVLGNRIEFVTTYLGVLRAQAVAVPVNPGSTVVELAGMLVDSGSRMVVVDERTAV
PVRSAVGRSEVAAAAHDESRPLPRLVVLGEPAPDELAYDDLRAEEPRPVPPLLDPEKLAV
LLYTSGTSGLPRAAMLTHRALLANVDQVATVEPPMIHSDDVVLGVLPLFHVYGLGAVLGG
VIRHRAKLVLTDRFDPEGTLDLIEDEACSVVPVAPPVFAAWRHVDALAERLGPVRMILSG
SAPLPAETVEEFSAAVRVPVHQGYGLTEASPVVTSTLRSATVKPGSVGAALDGIELRLVD
DEGVPVDGSAADDPGEIQIRGRNLFSGYWPEGADGPGADGWWSTGDVGFLDADGDLFLVD
RVKELIIVSGFNVYPSEVEAVLGEVAEVRQAAVLGTPDEHTGEAVVAYVVPDDPAADPES
VAAAVRARAEEHLAPYKRPVRVEVVETLPRTVTGKIRKGQLRGQERRKALGILE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaggacgctcccgccacgcccgacgtggccgccctcgtcgcggcggccgca
gccgaccatcccgaccggctggccgtcgtcgaggcgggcgggcgggggctgacctgggcc
gagctggacgacgaggtgagccgggtcgcgaccggcctgggggccgccggcgtcctcgcc
gggcaccgggtgatgatcgtgctgggcaaccggatcgagttcgtgacgacgtacctcggg
gtgctgcgggcgcaggccgtcgcggtgcccgtcaacccgggctcgacggtcgtcgagctg
gccgggatgctggtcgactccggctcccggatggtcgtggtcgacgagcggacggcggtc
ccggtccggtccgccgtgggccgcagcgaggtggctgccgccgcgcacgacgagtcccgc
ccgctgccgcgcctcgtcgtgctgggggagcccgcccccgacgagctcgcgtacgacgac
ctgcgggccgaggagccccgcccggtcccgccgctgctcgaccccgagaagctcgccgtc
ctgctctacacgagcggcacgtcgggcctgccgcgcgccgcgatgctgacccaccgcgcc
ctgctcgccaacgtcgaccaggtcgccaccgtcgagccgccgatgatccactccgacgac
gtggtgctgggcgtgctgccgctcttccacgtctacggcctcggcgccgttctcggtggc
gtgatccggcaccgggccaagctcgtgctgaccgaccgcttcgaccccgagggcacgctc
gacctgatcgaggacgaggcgtgcagcgtcgtccccgtcgccccgccggtgttcgccgcg
tggcgccacgtcgacgccctcgccgagcggctcggcccggtgcggatgatcctgtccggc
tcggcgccgctgccggccgagacggtcgaggagttcagcgccgccgtccgggtgccggtg
caccagggctacgggctcaccgaggcctcgccggtggtcaccagcacgctgcgctcggcc
acggtcaagcccggctcggtgggcgccgcgctcgacgggatcgagctgcgcctggtcgac
gacgagggcgtgcccgtcgacggctccgccgccgacgatcccggcgagatccagatccgg
ggacgcaacctgttcagcggctactggcccgagggggccgacggcccgggggccgacggc
tggtggtcgaccggcgacgtcggcttcctcgacgccgacggcgacctcttcctcgtcgac
cgggtcaaggagctcatcatcgtctccggcttcaacgtctacccgagcgaggtcgaggcg
gtgctcggcgaggtcgccgaggtccgccaggcggccgtgctcggcacgcccgacgagcac
accggcgaggcggtcgtcgcctacgtcgtcccggacgatccggctgccgacccggagtcc
gtcgccgcggcggtccgggcgcgggccgaggagcacctggcgccgtacaagcggccggtg
cgggtcgaggtcgtcgagacgctgccgcgcacggtcaccggcaagatccgcaagggtcag
ctgcgcggccaggagcggcgcaaggcgctggggatcctcgagtga
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